Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
KRT20P35900 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.79■□□□□ 0.12
KRT20P35900 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT20P35900 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.79■□□□□ 0.12
KRT20P35900 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT20P35900 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.79■□□□□ 0.12
KRT20P35900 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT20P35900 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT20P35900 PTCHD3P3-201ENST00000403073 906 ntBASIC15.79■□□□□ 0.12
KRT20P35900 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.79■□□□□ 0.12
KRT20P35900 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.79■□□□□ 0.12
KRT20P35900 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT20P35900 SLC25A6P4-201ENST00000586535 553 ntBASIC15.79■□□□□ 0.12
KRT20P35900 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.79■□□□□ 0.12
KRT20P35900 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT20P35900 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.79■□□□□ 0.12
KRT20P35900 AF228730.7-201ENST00000641842 219 ntBASIC15.79■□□□□ 0.12
KRT20P35900 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT20P35900 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT20P35900 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.79■□□□□ 0.12
KRT20P35900 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
KRT20P35900 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT20P35900 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT20P35900 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT20P35900 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT20P35900 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT20P35900 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.79■□□□□ 0.12
KRT20P35900 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT20P35900 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT20P35900 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT20P35900 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT20P35900 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
KRT20P35900 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT20P35900 AL021920.2-201ENST00000624828 1351 ntBASIC15.78■□□□□ 0.12
KRT20P35900 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT20P35900 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.78■□□□□ 0.12
KRT20P35900 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.78■□□□□ 0.12
KRT20P35900 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
KRT20P35900 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT20P35900 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT20P35900 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT20P35900 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT20P35900 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.78■□□□□ 0.12
KRT20P35900 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT20P35900 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT20P35900 AC026396.1-201ENST00000419388 421 ntBASIC15.78■□□□□ 0.12
KRT20P35900 KRT18P27-201ENST00000427733 1299 ntBASIC15.78■□□□□ 0.12
KRT20P35900 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.78■□□□□ 0.12
KRT20P35900 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.78■□□□□ 0.12
KRT20P35900 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.78■□□□□ 0.12
KRT20P35900 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT20P35900 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT20P35900 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT20P35900 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT20P35900 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT20P35900 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT20P35900 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT20P35900 TSPY26P-202ENST00000565928 3884 ntBASIC15.78■□□□□ 0.12
KRT20P35900 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.78■□□□□ 0.12
KRT20P35900 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT20P35900 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT20P35900 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.78■□□□□ 0.12
KRT20P35900 AP002414.3-201ENST00000589352 1468 ntBASIC15.78■□□□□ 0.12
KRT20P35900 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.78■□□□□ 0.12
KRT20P35900 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
KRT20P35900 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.77■□□□□ 0.12
KRT20P35900 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
KRT20P35900 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
KRT20P35900 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRT20P35900 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRT20P35900 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.77■□□□□ 0.12
KRT20P35900 AC067930.6-201ENST00000623257 4947 ntBASIC15.77■□□□□ 0.12
KRT20P35900 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRT20P35900 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
KRT20P35900 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.77■□□□□ 0.12
KRT20P35900 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRT20P35900 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRT20P35900 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRT20P35900 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRT20P35900 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
KRT20P35900 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRT20P35900 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.77■□□□□ 0.12
KRT20P35900 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRT20P35900 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.77■□□□□ 0.12
KRT20P35900 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.77■□□□□ 0.12
KRT20P35900 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.77■□□□□ 0.12
KRT20P35900 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
KRT20P35900 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.77■□□□□ 0.12
KRT20P35900 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.77■□□□□ 0.12
KRT20P35900 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
KRT20P35900 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.77■□□□□ 0.11
KRT20P35900 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
KRT20P35900 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
KRT20P35900 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
KRT20P35900 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
KRT20P35900 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.77■□□□□ 0.11
KRT20P35900 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
KRT20P35900 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.77■□□□□ 0.11
KRT20P35900 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
KRT20P35900 AC024909.3-201ENST00000611513 2257 ntBASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms