Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN7P35236 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN7P35236 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.07■□□□□ 0.32
PTPN7P35236 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN7P35236 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.07■□□□□ 0.32
PTPN7P35236 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.07■□□□□ 0.32
PTPN7P35236 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN7P35236 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.06■□□□□ 0.32
PTPN7P35236 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PTPN7P35236 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN7P35236 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN7P35236 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN7P35236 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN7P35236 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN7P35236 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
PTPN7P35236 U82695.1-201ENST00000635752 1889 ntBASIC17.06■□□□□ 0.32
PTPN7P35236 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN7P35236 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN7P35236 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN7P35236 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN7P35236 AC098831.1-202ENST00000438821 336 ntBASIC17.06■□□□□ 0.32
PTPN7P35236 AC009947.1-201ENST00000444350 727 ntBASIC17.06■□□□□ 0.32
PTPN7P35236 RNA5SP419-201ENST00000515908 135 ntBASIC17.06■□□□□ 0.32
PTPN7P35236 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
PTPN7P35236 AC109635.5-201ENST00000533593 962 ntBASIC17.06■□□□□ 0.32
PTPN7P35236 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
PTPN7P35236 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN7P35236 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.06■□□□□ 0.32
PTPN7P35236 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN7P35236 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN7P35236 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PTPN7P35236 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN7P35236 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PTPN7P35236 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN7P35236 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN7P35236 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN7P35236 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN7P35236 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN7P35236 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN7P35236 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.06■□□□□ 0.32
PTPN7P35236 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN7P35236 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN7P35236 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN7P35236 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN7P35236 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN7P35236 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN7P35236 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PTPN7P35236 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN7P35236 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN7P35236 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN7P35236 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.06■□□□□ 0.32
PTPN7P35236 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PTPN7P35236 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN7P35236 AC010491.1-201ENST00000563101 2797 ntBASIC17.06■□□□□ 0.32
PTPN7P35236 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN7P35236 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.05■□□□□ 0.32
PTPN7P35236 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN7P35236 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PTPN7P35236 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN7P35236 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN7P35236 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN7P35236 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN7P35236 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN7P35236 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.05■□□□□ 0.32
PTPN7P35236 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.05■□□□□ 0.32
PTPN7P35236 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN7P35236 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PTPN7P35236 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
PTPN7P35236 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PTPN7P35236 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN7P35236 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.05■□□□□ 0.32
PTPN7P35236 HCG4B-203ENST00000450128 991 ntBASIC17.05■□□□□ 0.32
PTPN7P35236 AL513480.1-201ENST00000451731 511 ntBASIC17.05■□□□□ 0.32
PTPN7P35236 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.05■□□□□ 0.32
PTPN7P35236 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN7P35236 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.05■□□□□ 0.32
PTPN7P35236 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.05■□□□□ 0.32
PTPN7P35236 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN7P35236 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN7P35236 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.05■□□□□ 0.32
PTPN7P35236 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.05■□□□□ 0.32
PTPN7P35236 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN7P35236 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN7P35236 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
PTPN7P35236 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
PTPN7P35236 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PTPN7P35236 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN7P35236 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN7P35236 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN7P35236 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.04■□□□□ 0.32
PTPN7P35236 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN7P35236 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPN7P35236 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN7P35236 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
PTPN7P35236 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN7P35236 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN7P35236 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
PTPN7P35236 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN7P35236 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN7P35236 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms