Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 AL596275.1-201ENST00000423464 877 ntBASIC16.63■□□□□ 0.25
LSP1P33241 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LSP1P33241 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LSP1P33241 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LSP1P33241 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.63■□□□□ 0.25
LSP1P33241 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.63■□□□□ 0.25
LSP1P33241 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSP1P33241 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LSP1P33241 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.63■□□□□ 0.25
LSP1P33241 FITM1-202ENST00000559294 800 ntBASIC16.63■□□□□ 0.25
LSP1P33241 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.63■□□□□ 0.25
LSP1P33241 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.63■□□□□ 0.25
LSP1P33241 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.63■□□□□ 0.25
LSP1P33241 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.63■□□□□ 0.25
LSP1P33241 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LSP1P33241 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LSP1P33241 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LSP1P33241 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.63■□□□□ 0.25
LSP1P33241 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LSP1P33241 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LSP1P33241 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.63■□□□□ 0.25
LSP1P33241 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.63■□□□□ 0.25
LSP1P33241 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
LSP1P33241 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.63■□□□□ 0.25
LSP1P33241 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.63■□□□□ 0.25
LSP1P33241 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LSP1P33241 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LSP1P33241 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LSP1P33241 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSP1P33241 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LSP1P33241 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
LSP1P33241 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.62■□□□□ 0.25
LSP1P33241 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LSP1P33241 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSP1P33241 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.62■□□□□ 0.25
LSP1P33241 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.62■□□□□ 0.25
LSP1P33241 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LSP1P33241 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LSP1P33241 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LSP1P33241 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.62■□□□□ 0.25
LSP1P33241 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSP1P33241 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
LSP1P33241 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.62■□□□□ 0.25
LSP1P33241 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
LSP1P33241 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSP1P33241 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSP1P33241 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LSP1P33241 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.62■□□□□ 0.25
LSP1P33241 AP000523.1-201ENST00000398242 1049 ntBASIC16.62■□□□□ 0.25
LSP1P33241 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.62■□□□□ 0.25
LSP1P33241 AL390955.1-201ENST00000428694 934 ntBASIC16.62■□□□□ 0.25
LSP1P33241 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.62■□□□□ 0.25
LSP1P33241 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.62■□□□□ 0.25
LSP1P33241 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.62■□□□□ 0.25
LSP1P33241 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.62■□□□□ 0.25
LSP1P33241 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.62■□□□□ 0.25
LSP1P33241 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.62■□□□□ 0.25
LSP1P33241 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSP1P33241 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSP1P33241 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSP1P33241 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSP1P33241 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.62■□□□□ 0.25
LSP1P33241 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LSP1P33241 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSP1P33241 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.62■□□□□ 0.25
LSP1P33241 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSP1P33241 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSP1P33241 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSP1P33241 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSP1P33241 LINC00552-201ENST00000625151 2579 ntBASIC16.62■□□□□ 0.25
LSP1P33241 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSP1P33241 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.62■□□□□ 0.25
LSP1P33241 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSP1P33241 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSP1P33241 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.62■□□□□ 0.25
LSP1P33241 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSP1P33241 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.62■□□□□ 0.25
LSP1P33241 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LSP1P33241 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LSP1P33241 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LSP1P33241 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LSP1P33241 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LSP1P33241 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LSP1P33241 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
LSP1P33241 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LSP1P33241 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSP1P33241 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSP1P33241 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSP1P33241 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSP1P33241 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LSP1P33241 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LSP1P33241 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSP1P33241 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
LSP1P33241 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LSP1P33241 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LSP1P33241 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LSP1P33241 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LSP1P33241 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSP1P33241 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LSP1P33241 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms