Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 PAWRP1-201ENST00000451083 565 ntBASIC16.13■□□□□ 0.17
EPHA3P29320 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
EPHA3P29320 MIR3180-1-201ENST00000580374 94 ntBASIC16.13■□□□□ 0.17
EPHA3P29320 MIR3180-3-201ENST00000584616 94 ntBASIC16.13■□□□□ 0.17
EPHA3P29320 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
EPHA3P29320 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.13■□□□□ 0.17
EPHA3P29320 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
EPHA3P29320 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.13■□□□□ 0.17
EPHA3P29320 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.13■□□□□ 0.17
EPHA3P29320 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
EPHA3P29320 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
EPHA3P29320 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
EPHA3P29320 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
EPHA3P29320 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
EPHA3P29320 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
EPHA3P29320 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
EPHA3P29320 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
EPHA3P29320 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.13■□□□□ 0.17
EPHA3P29320 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
EPHA3P29320 AC131009.4-201ENST00000624048 1740 ntBASIC16.13■□□□□ 0.17
EPHA3P29320 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
EPHA3P29320 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.13■□□□□ 0.17
EPHA3P29320 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
EPHA3P29320 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
EPHA3P29320 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
EPHA3P29320 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
EPHA3P29320 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
EPHA3P29320 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
EPHA3P29320 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.12■□□□□ 0.17
EPHA3P29320 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EPHA3P29320 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
EPHA3P29320 LINC02228-204ENST00000642115 2962 ntBASIC16.12■□□□□ 0.17
EPHA3P29320 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EPHA3P29320 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.12■□□□□ 0.17
EPHA3P29320 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EPHA3P29320 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
EPHA3P29320 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EPHA3P29320 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.12■□□□□ 0.17
EPHA3P29320 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
EPHA3P29320 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.12■□□□□ 0.17
EPHA3P29320 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
EPHA3P29320 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
EPHA3P29320 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
EPHA3P29320 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
EPHA3P29320 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
EPHA3P29320 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.12■□□□□ 0.17
EPHA3P29320 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
EPHA3P29320 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.12■□□□□ 0.17
EPHA3P29320 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
EPHA3P29320 POU5F1P6-201ENST00000466990 990 ntBASIC16.12■□□□□ 0.17
EPHA3P29320 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
EPHA3P29320 AP001269.4-201ENST00000609611 512 ntBASIC16.12■□□□□ 0.17
EPHA3P29320 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.12■□□□□ 0.17
EPHA3P29320 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EPHA3P29320 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.12■□□□□ 0.17
EPHA3P29320 AC013268.4-201ENST00000637413 2228 ntBASIC16.12■□□□□ 0.17
EPHA3P29320 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.12■□□□□ 0.17
EPHA3P29320 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
EPHA3P29320 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
EPHA3P29320 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
EPHA3P29320 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
EPHA3P29320 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EPHA3P29320 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EPHA3P29320 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EPHA3P29320 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EPHA3P29320 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
EPHA3P29320 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.12■□□□□ 0.17
EPHA3P29320 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.12■□□□□ 0.17
EPHA3P29320 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.11■□□□□ 0.17
EPHA3P29320 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.11■□□□□ 0.17
EPHA3P29320 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
EPHA3P29320 LINC01144-201ENST00000626198 1710 ntBASIC16.11■□□□□ 0.17
EPHA3P29320 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.11■□□□□ 0.17
EPHA3P29320 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
EPHA3P29320 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
EPHA3P29320 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
EPHA3P29320 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
EPHA3P29320 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
EPHA3P29320 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
EPHA3P29320 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
EPHA3P29320 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EPHA3P29320 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
EPHA3P29320 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
EPHA3P29320 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.11■□□□□ 0.17
EPHA3P29320 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
EPHA3P29320 PCED1CP-201ENST00000419887 785 ntBASIC16.11■□□□□ 0.17
EPHA3P29320 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.11■□□□□ 0.17
EPHA3P29320 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.11■□□□□ 0.17
EPHA3P29320 AC012615.1-201ENST00000565797 1299 ntBASIC16.11■□□□□ 0.17
EPHA3P29320 AL591684.3-201ENST00000605187 298 ntBASIC16.11■□□□□ 0.17
EPHA3P29320 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.11■□□□□ 0.17
EPHA3P29320 REXO1L3P-201ENST00000622202 1288 ntBASIC16.11■□□□□ 0.17
EPHA3P29320 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
EPHA3P29320 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
EPHA3P29320 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
EPHA3P29320 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
EPHA3P29320 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EPHA3P29320 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
EPHA3P29320 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
EPHA3P29320 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms