Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAMP1P23763 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VAMP1P23763 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
VAMP1P23763 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.03□□□□□ -0.16
VAMP1P23763 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAMP1P23763 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.03□□□□□ -0.16
VAMP1P23763 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
VAMP1P23763 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAMP1P23763 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VAMP1P23763 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VAMP1P23763 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.02□□□□□ -0.16
VAMP1P23763 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.02□□□□□ -0.16
VAMP1P23763 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VAMP1P23763 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
VAMP1P23763 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VAMP1P23763 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VAMP1P23763 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
VAMP1P23763 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VAMP1P23763 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
VAMP1P23763 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
VAMP1P23763 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VAMP1P23763 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
VAMP1P23763 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.02□□□□□ -0.16
VAMP1P23763 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.02□□□□□ -0.16
VAMP1P23763 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.02□□□□□ -0.16
VAMP1P23763 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VAMP1P23763 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VAMP1P23763 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VAMP1P23763 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
VAMP1P23763 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
VAMP1P23763 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VAMP1P23763 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VAMP1P23763 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
VAMP1P23763 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VAMP1P23763 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
VAMP1P23763 TSPY7P-201ENST00000431358 1114 ntBASIC14.02□□□□□ -0.17
VAMP1P23763 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.02□□□□□ -0.17
VAMP1P23763 HLA-F-220ENST00000434407 884 ntBASIC14.02□□□□□ -0.17
VAMP1P23763 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.02□□□□□ -0.17
VAMP1P23763 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC14.02□□□□□ -0.17
VAMP1P23763 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VAMP1P23763 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VAMP1P23763 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VAMP1P23763 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VAMP1P23763 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VAMP1P23763 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VAMP1P23763 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
VAMP1P23763 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.02□□□□□ -0.17
VAMP1P23763 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VAMP1P23763 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VAMP1P23763 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VAMP1P23763 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VAMP1P23763 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
VAMP1P23763 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VAMP1P23763 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.02□□□□□ -0.17
VAMP1P23763 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
VAMP1P23763 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
VAMP1P23763 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VAMP1P23763 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VAMP1P23763 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
VAMP1P23763 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VAMP1P23763 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
VAMP1P23763 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.01□□□□□ -0.17
VAMP1P23763 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.01□□□□□ -0.17
VAMP1P23763 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VAMP1P23763 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VAMP1P23763 CYP2D8P-201ENST00000433633 1490 ntBASIC14.01□□□□□ -0.17
VAMP1P23763 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VAMP1P23763 AC002310.6-201ENST00000624451 1377 ntBASIC14.01□□□□□ -0.17
VAMP1P23763 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VAMP1P23763 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.01□□□□□ -0.17
VAMP1P23763 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VAMP1P23763 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.01□□□□□ -0.17
VAMP1P23763 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VAMP1P23763 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VAMP1P23763 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.01□□□□□ -0.17
VAMP1P23763 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.01□□□□□ -0.17
VAMP1P23763 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.01□□□□□ -0.17
VAMP1P23763 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.01□□□□□ -0.17
VAMP1P23763 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VAMP1P23763 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.01□□□□□ -0.17
VAMP1P23763 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
VAMP1P23763 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VAMP1P23763 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
VAMP1P23763 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VAMP1P23763 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VAMP1P23763 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
VAMP1P23763 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VAMP1P23763 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VAMP1P23763 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VAMP1P23763 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VAMP1P23763 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VAMP1P23763 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
VAMP1P23763 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.01□□□□□ -0.17
VAMP1P23763 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VAMP1P23763 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VAMP1P23763 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VAMP1P23763 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VAMP1P23763 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VAMP1P23763 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms