Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTPS1P17812 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTPS1P17812 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTPS1P17812 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.6■□□□□ 0.25
CTPS1P17812 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.6■□□□□ 0.25
CTPS1P17812 DNAJB3-202ENST00000449667 1266 ntBASIC16.6■□□□□ 0.25
CTPS1P17812 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.6■□□□□ 0.25
CTPS1P17812 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.6■□□□□ 0.25
CTPS1P17812 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CTPS1P17812 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
CTPS1P17812 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.6■□□□□ 0.25
CTPS1P17812 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.6■□□□□ 0.25
CTPS1P17812 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.6■□□□□ 0.25
CTPS1P17812 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.6■□□□□ 0.25
CTPS1P17812 GPALPP1-207ENST00000611650 899 ntBASIC16.6■□□□□ 0.25
CTPS1P17812 AC020765.3-201ENST00000613051 740 ntBASIC16.6■□□□□ 0.25
CTPS1P17812 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.6■□□□□ 0.25
CTPS1P17812 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTPS1P17812 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.6■□□□□ 0.25
CTPS1P17812 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CTPS1P17812 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTPS1P17812 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTPS1P17812 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.6■□□□□ 0.25
CTPS1P17812 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTPS1P17812 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTPS1P17812 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTPS1P17812 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTPS1P17812 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTPS1P17812 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CTPS1P17812 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS1P17812 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS1P17812 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
CTPS1P17812 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS1P17812 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CTPS1P17812 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.59■□□□□ 0.25
CTPS1P17812 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.59■□□□□ 0.25
CTPS1P17812 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CTPS1P17812 AC124067.4-201ENST00000519691 2379 ntBASIC16.59■□□□□ 0.25
CTPS1P17812 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS1P17812 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.59■□□□□ 0.25
CTPS1P17812 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CTPS1P17812 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS1P17812 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CTPS1P17812 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS1P17812 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.59■□□□□ 0.25
CTPS1P17812 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.59■□□□□ 0.25
CTPS1P17812 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS1P17812 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.59■□□□□ 0.25
CTPS1P17812 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS1P17812 AC004461.1-201ENST00000412461 403 ntBASIC16.59■□□□□ 0.25
CTPS1P17812 SPCS2P4-201ENST00000436160 681 ntBASIC16.59■□□□□ 0.25
CTPS1P17812 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.59■□□□□ 0.25
CTPS1P17812 RN7SL589P-201ENST00000481268 310 ntBASIC16.59■□□□□ 0.25
CTPS1P17812 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.59■□□□□ 0.25
CTPS1P17812 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.59■□□□□ 0.25
CTPS1P17812 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.59■□□□□ 0.25
CTPS1P17812 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS1P17812 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.59■□□□□ 0.25
CTPS1P17812 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.59■□□□□ 0.25
CTPS1P17812 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.59■□□□□ 0.25
CTPS1P17812 SNHG9-202ENST00000564014 471 ntBASIC16.59■□□□□ 0.25
CTPS1P17812 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.59■□□□□ 0.25
CTPS1P17812 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.59■□□□□ 0.25
CTPS1P17812 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CTPS1P17812 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS1P17812 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS1P17812 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS1P17812 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS1P17812 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS1P17812 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS1P17812 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS1P17812 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CTPS1P17812 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.59■□□□□ 0.25
CTPS1P17812 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CTPS1P17812 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS1P17812 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTPS1P17812 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.59■□□□□ 0.25
CTPS1P17812 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.58■□□□□ 0.25
CTPS1P17812 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
CTPS1P17812 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.58■□□□□ 0.25
CTPS1P17812 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
CTPS1P17812 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CTPS1P17812 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CTPS1P17812 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.58■□□□□ 0.25
CTPS1P17812 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CTPS1P17812 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTPS1P17812 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTPS1P17812 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CTPS1P17812 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
CTPS1P17812 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTPS1P17812 AL592309.1-201ENST00000443127 649 ntBASIC16.58■□□□□ 0.24
CTPS1P17812 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTPS1P17812 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CTPS1P17812 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.58■□□□□ 0.24
CTPS1P17812 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.58■□□□□ 0.24
CTPS1P17812 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.58■□□□□ 0.24
CTPS1P17812 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.58■□□□□ 0.24
CTPS1P17812 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.58■□□□□ 0.24
CTPS1P17812 AC027307.2-201ENST00000591252 911 ntBASIC16.58■□□□□ 0.24
CTPS1P17812 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms