Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NCK1P16333 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NCK1P16333 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NCK1P16333 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NCK1P16333 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NCK1P16333 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.66■□□□□ 0.1
NCK1P16333 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NCK1P16333 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NCK1P16333 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.66■□□□□ 0.1
NCK1P16333 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.66■□□□□ 0.1
NCK1P16333 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NCK1P16333 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NCK1P16333 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NCK1P16333 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
NCK1P16333 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NCK1P16333 PCGF3-213ENST00000620529 1899 ntBASIC15.66■□□□□ 0.1
NCK1P16333 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NCK1P16333 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.66■□□□□ 0.1
NCK1P16333 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.66■□□□□ 0.1
NCK1P16333 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NCK1P16333 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NCK1P16333 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.66■□□□□ 0.1
NCK1P16333 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.66■□□□□ 0.1
NCK1P16333 TOB2P1-201ENST00000469761 992 ntBASIC15.66■□□□□ 0.1
NCK1P16333 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.66■□□□□ 0.1
NCK1P16333 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.66■□□□□ 0.1
NCK1P16333 DUX4L26-201ENST00000489078 1255 ntBASIC15.66■□□□□ 0.1
NCK1P16333 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.66■□□□□ 0.1
NCK1P16333 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.66■□□□□ 0.1
NCK1P16333 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.66■□□□□ 0.1
NCK1P16333 AC066615.1-201ENST00000640911 628 ntBASIC15.66■□□□□ 0.1
NCK1P16333 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NCK1P16333 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NCK1P16333 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.66■□□□□ 0.1
NCK1P16333 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NCK1P16333 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NCK1P16333 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NCK1P16333 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NCK1P16333 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NCK1P16333 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NCK1P16333 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.65■□□□□ 0.1
NCK1P16333 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.65■□□□□ 0.1
NCK1P16333 PPT1-215ENST00000641471 2368 ntBASIC15.65■□□□□ 0.1
NCK1P16333 AC079776.2-201ENST00000641154 1609 ntBASIC15.65■□□□□ 0.1
NCK1P16333 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NCK1P16333 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NCK1P16333 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NCK1P16333 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NCK1P16333 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.65■□□□□ 0.1
NCK1P16333 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NCK1P16333 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NCK1P16333 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NCK1P16333 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
NCK1P16333 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NCK1P16333 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NCK1P16333 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
NCK1P16333 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.65■□□□□ 0.1
NCK1P16333 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
NCK1P16333 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NCK1P16333 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
NCK1P16333 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.65■□□□□ 0.1
NCK1P16333 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NCK1P16333 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.65■□□□□ 0.1
NCK1P16333 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NCK1P16333 TPSP2-201ENST00000561760 610 ntBASIC15.65■□□□□ 0.1
NCK1P16333 LINC01238-205ENST00000567549 1107 ntBASIC15.65■□□□□ 0.1
NCK1P16333 MIR4492-201ENST00000581627 80 ntBASIC15.65■□□□□ 0.1
NCK1P16333 AC114341.1-201ENST00000618070 349 ntBASIC15.65■□□□□ 0.1
NCK1P16333 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NCK1P16333 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NCK1P16333 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.65■□□□□ 0.1
NCK1P16333 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
NCK1P16333 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NCK1P16333 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NCK1P16333 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.65■□□□□ 0.1
NCK1P16333 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NCK1P16333 LINC02228-204ENST00000642115 2962 ntBASIC15.65■□□□□ 0.1
NCK1P16333 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NCK1P16333 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NCK1P16333 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NCK1P16333 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.65■□□□□ 0.1
NCK1P16333 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NCK1P16333 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NCK1P16333 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.65■□□□□ 0.1
NCK1P16333 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
NCK1P16333 TNRC18P2-201ENST00000417666 2714 ntBASIC15.65■□□□□ 0.1
NCK1P16333 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NCK1P16333 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NCK1P16333 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.65■□□□□ 0.1
NCK1P16333 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NCK1P16333 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NCK1P16333 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NCK1P16333 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.64■□□□□ 0.09
NCK1P16333 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NCK1P16333 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NCK1P16333 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NCK1P16333 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
NCK1P16333 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NCK1P16333 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
NCK1P16333 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms