Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 KRT8P39-201ENST00000396270 1433 ntBASIC13.78□□□□□ -0.2
IGHV3-43DP0DP04 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IGHV3-43DP0DP04 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
IGHV3-43DP0DP04 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IGHV3-43DP0DP04 GGT3P-204ENST00000453783 1664 ntBASIC13.78□□□□□ -0.2
IGHV3-43DP0DP04 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
IGHV3-43DP0DP04 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IGHV3-43DP0DP04 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IGHV3-43DP0DP04 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
IGHV3-43DP0DP04 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
IGHV3-43DP0DP04 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IGHV3-43DP0DP04 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
IGHV3-43DP0DP04 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
IGHV3-43DP0DP04 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
IGHV3-43DP0DP04 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
IGHV3-43DP0DP04 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.78□□□□□ -0.2
IGHV3-43DP0DP04 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.78□□□□□ -0.2
IGHV3-43DP0DP04 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
IGHV3-43DP0DP04 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
IGHV3-43DP0DP04 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.78□□□□□ -0.2
IGHV3-43DP0DP04 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.78□□□□□ -0.2
IGHV3-43DP0DP04 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
IGHV3-43DP0DP04 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
IGHV3-43DP0DP04 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
IGHV3-43DP0DP04 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
IGHV3-43DP0DP04 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
IGHV3-43DP0DP04 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
IGHV3-43DP0DP04 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 KRT126P-201ENST00000549467 1181 ntBASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 AC087641.1-201ENST00000557561 1021 ntBASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 AC026691.1-201ENST00000602502 2017 ntBASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 AC129492.6-201ENST00000611383 1305 ntBASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 AP001350.2-201ENST00000625104 1094 ntBASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGHV3-43DP0DP04 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
IGHV3-43DP0DP04 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
IGHV3-43DP0DP04 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.76□□□□□ -0.21
IGHV3-43DP0DP04 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
IGHV3-43DP0DP04 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGHV3-43DP0DP04 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGHV3-43DP0DP04 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGHV3-43DP0DP04 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGHV3-43DP0DP04 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGHV3-43DP0DP04 GGT4P-201ENST00000623672 1708 ntBASIC13.76□□□□□ -0.21
IGHV3-43DP0DP04 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
IGHV3-43DP0DP04 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.76□□□□□ -0.21
IGHV3-43DP0DP04 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.76□□□□□ -0.21
IGHV3-43DP0DP04 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.76□□□□□ -0.21
IGHV3-43DP0DP04 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
IGHV3-43DP0DP04 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGHV3-43DP0DP04 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGHV3-43DP0DP04 AC132872.4-202ENST00000622924 2756 ntBASIC13.76□□□□□ -0.21
IGHV3-43DP0DP04 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGHV3-43DP0DP04 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.76□□□□□ -0.21
IGHV3-43DP0DP04 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGHV3-43DP0DP04 TSPY26P-202ENST00000565928 3884 ntBASIC13.76□□□□□ -0.21
IGHV3-43DP0DP04 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms