Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 POU5F1P6-201ENST00000466990 990 ntBASIC14.56□□□□□ -0.08
UBCP0CG48 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.56□□□□□ -0.08
UBCP0CG48 FOSL1P1-201ENST00000511041 816 ntBASIC14.56□□□□□ -0.08
UBCP0CG48 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.56□□□□□ -0.08
UBCP0CG48 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
UBCP0CG48 AC004706.3-202ENST00000621574 984 ntBASIC14.56□□□□□ -0.08
UBCP0CG48 REXO1L3P-201ENST00000622202 1288 ntBASIC14.56□□□□□ -0.08
UBCP0CG48 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.56□□□□□ -0.08
UBCP0CG48 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBCP0CG48 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBCP0CG48 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
UBCP0CG48 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBCP0CG48 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.56□□□□□ -0.08
UBCP0CG48 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBCP0CG48 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBCP0CG48 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBCP0CG48 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.56□□□□□ -0.08
UBCP0CG48 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBCP0CG48 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBCP0CG48 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBCP0CG48 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBCP0CG48 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.55□□□□□ -0.08
UBCP0CG48 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
UBCP0CG48 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
UBCP0CG48 PI4KAP1-204ENST00000612579 1703 ntBASIC14.55□□□□□ -0.08
UBCP0CG48 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
UBCP0CG48 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.55□□□□□ -0.08
UBCP0CG48 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
UBCP0CG48 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.55□□□□□ -0.08
UBCP0CG48 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.55□□□□□ -0.08
UBCP0CG48 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.55□□□□□ -0.08
UBCP0CG48 NORAD-201ENST00000565493 5339 ntBASIC14.55□□□□□ -0.08
UBCP0CG48 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.55□□□□□ -0.08
UBCP0CG48 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.55□□□□□ -0.08
UBCP0CG48 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.55□□□□□ -0.08
UBCP0CG48 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.55□□□□□ -0.08
UBCP0CG48 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.55□□□□□ -0.08
UBCP0CG48 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 AL732292.2-201ENST00000609649 430 ntBASIC14.55□□□□□ -0.08
UBCP0CG48 AL355877.3-201ENST00000622820 899 ntBASIC14.55□□□□□ -0.08
UBCP0CG48 AP001350.2-201ENST00000625104 1094 ntBASIC14.55□□□□□ -0.08
UBCP0CG48 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.55□□□□□ -0.08
UBCP0CG48 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.55□□□□□ -0.08
UBCP0CG48 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.55□□□□□ -0.08
UBCP0CG48 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.55□□□□□ -0.08
UBCP0CG48 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.55□□□□□ -0.08
UBCP0CG48 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 LINC01144-201ENST00000626198 1710 ntBASIC14.55□□□□□ -0.08
UBCP0CG48 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 FLJ16779-201ENST00000612722 7638 ntBASIC14.55□□□□□ -0.08
UBCP0CG48 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.55□□□□□ -0.08
UBCP0CG48 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBCP0CG48 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBCP0CG48 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBCP0CG48 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.54□□□□□ -0.08
UBCP0CG48 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBCP0CG48 PAUPAR-201ENST00000630360 2965 ntBASIC14.54□□□□□ -0.08
UBCP0CG48 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBCP0CG48 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBCP0CG48 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBCP0CG48 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
UBCP0CG48 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.54□□□□□ -0.08
UBCP0CG48 SCARNA2-201ENST00000458748 420 ntBASIC14.54□□□□□ -0.08
UBCP0CG48 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBCP0CG48 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UBCP0CG48 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.54□□□□□ -0.08
UBCP0CG48 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.54□□□□□ -0.08
UBCP0CG48 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.54□□□□□ -0.08
UBCP0CG48 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.54□□□□□ -0.08
UBCP0CG48 MTDHP4-201ENST00000600287 670 ntBASIC14.54□□□□□ -0.08
UBCP0CG48 AC093458.2-201ENST00000623150 629 ntBASIC14.54□□□□□ -0.08
UBCP0CG48 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.54□□□□□ -0.08
UBCP0CG48 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms