Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CCNYL3P0C7X3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCNYL3P0C7X3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16■□□□□ 0.15
CCNYL3P0C7X3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCNYL3P0C7X3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCNYL3P0C7X3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCNYL3P0C7X3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCNYL3P0C7X3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CCNYL3P0C7X3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 AKAP8P1-201ENST00000434743 1349 ntBASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 AC093512.1-201ENST00000617969 520 ntBASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCNYL3P0C7X3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 AL353732.1-201ENST00000569618 1459 ntBASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 AL627223.1-201ENST00000416693 442 ntBASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 FAM8A3P-201ENST00000427218 844 ntBASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 AC067863.1-201ENST00000494933 530 ntBASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 RARRES2P8-201ENST00000566335 367 ntBASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
CCNYL3P0C7X3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CCNYL3P0C7X3 AC005915.1-201ENST00000624912 2018 ntBASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms