Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CYP3A4P08684 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CYP3A4P08684 AL035456.1-201ENST00000456064 1369 ntBASIC18.46■□□□□ 0.55
CYP3A4P08684 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CYP3A4P08684 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CYP3A4P08684 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CYP3A4P08684 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CYP3A4P08684 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CYP3A4P08684 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CYP3A4P08684 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CYP3A4P08684 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CYP3A4P08684 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CYP3A4P08684 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CYP3A4P08684 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.46■□□□□ 0.55
CYP3A4P08684 AC107890.1-201ENST00000422478 521 ntBASIC18.46■□□□□ 0.55
CYP3A4P08684 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.46■□□□□ 0.55
CYP3A4P08684 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CYP3A4P08684 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CYP3A4P08684 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CYP3A4P08684 DUX4L27-201ENST00000554796 1261 ntBASIC18.46■□□□□ 0.55
CYP3A4P08684 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.46■□□□□ 0.55
CYP3A4P08684 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.46■□□□□ 0.55
CYP3A4P08684 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CYP3A4P08684 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.46■□□□□ 0.55
CYP3A4P08684 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.46■□□□□ 0.55
CYP3A4P08684 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.46■□□□□ 0.55
CYP3A4P08684 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.46■□□□□ 0.55
CYP3A4P08684 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CYP3A4P08684 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CYP3A4P08684 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.46■□□□□ 0.55
CYP3A4P08684 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.46■□□□□ 0.55
CYP3A4P08684 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CYP3A4P08684 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
CYP3A4P08684 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CYP3A4P08684 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CYP3A4P08684 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CYP3A4P08684 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CYP3A4P08684 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.45■□□□□ 0.54
CYP3A4P08684 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.45■□□□□ 0.54
CYP3A4P08684 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CYP3A4P08684 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CYP3A4P08684 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.45■□□□□ 0.54
CYP3A4P08684 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.45■□□□□ 0.54
CYP3A4P08684 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CYP3A4P08684 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CYP3A4P08684 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CYP3A4P08684 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CYP3A4P08684 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.45■□□□□ 0.54
CYP3A4P08684 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.45■□□□□ 0.54
CYP3A4P08684 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
CYP3A4P08684 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.45■□□□□ 0.54
CYP3A4P08684 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CYP3A4P08684 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.45■□□□□ 0.54
CYP3A4P08684 AC125807.1-201ENST00000483097 614 ntBASIC18.45■□□□□ 0.54
CYP3A4P08684 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.45■□□□□ 0.54
CYP3A4P08684 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.45■□□□□ 0.54
CYP3A4P08684 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.45■□□□□ 0.54
CYP3A4P08684 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CYP3A4P08684 AC105021.1-202ENST00000570572 669 ntBASIC18.45■□□□□ 0.54
CYP3A4P08684 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.45■□□□□ 0.54
CYP3A4P08684 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.45■□□□□ 0.54
CYP3A4P08684 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.45■□□□□ 0.54
CYP3A4P08684 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CYP3A4P08684 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CYP3A4P08684 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.45■□□□□ 0.54
CYP3A4P08684 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CYP3A4P08684 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
CYP3A4P08684 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CYP3A4P08684 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CYP3A4P08684 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.45■□□□□ 0.54
CYP3A4P08684 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.45■□□□□ 0.54
CYP3A4P08684 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.45■□□□□ 0.54
CYP3A4P08684 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CYP3A4P08684 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CYP3A4P08684 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CYP3A4P08684 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CYP3A4P08684 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.44■□□□□ 0.54
CYP3A4P08684 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.44■□□□□ 0.54
CYP3A4P08684 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.44■□□□□ 0.54
CYP3A4P08684 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CYP3A4P08684 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CYP3A4P08684 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
CYP3A4P08684 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
CYP3A4P08684 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.44■□□□□ 0.54
CYP3A4P08684 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.44■□□□□ 0.54
CYP3A4P08684 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CYP3A4P08684 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.44■□□□□ 0.54
CYP3A4P08684 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.44■□□□□ 0.54
CYP3A4P08684 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CYP3A4P08684 AL355385.1-201ENST00000606123 409 ntBASIC18.44■□□□□ 0.54
CYP3A4P08684 RN7SL828P-201ENST00000607615 303 ntBASIC18.44■□□□□ 0.54
CYP3A4P08684 AL133215.2-201ENST00000609242 977 ntBASIC18.44■□□□□ 0.54
CYP3A4P08684 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.44■□□□□ 0.54
CYP3A4P08684 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CYP3A4P08684 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CYP3A4P08684 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CYP3A4P08684 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.44■□□□□ 0.54
CYP3A4P08684 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.44■□□□□ 0.54
CYP3A4P08684 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CYP3A4P08684 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms