Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 AC016396.2-201ENST00000562575 1417 ntBASIC13.1□□□□□ -0.31
CSN3P07498 AC104109.2-201ENST00000602919 1418 ntBASIC13.1□□□□□ -0.31
CSN3P07498 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSN3P07498 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.1□□□□□ -0.31
CSN3P07498 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSN3P07498 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSN3P07498 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
CSN3P07498 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CSN3P07498 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSN3P07498 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSN3P07498 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.1□□□□□ -0.31
CSN3P07498 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSN3P07498 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSN3P07498 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSN3P07498 AL590787.1-201ENST00000568856 1315 ntBASIC13.1□□□□□ -0.31
CSN3P07498 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CSN3P07498 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSN3P07498 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.1□□□□□ -0.31
CSN3P07498 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CSN3P07498 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSN3P07498 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CSN3P07498 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSN3P07498 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.09□□□□□ -0.31
CSN3P07498 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.09□□□□□ -0.31
CSN3P07498 ZNF259P1-201ENST00000407656 1365 ntBASIC13.09□□□□□ -0.31
CSN3P07498 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CSN3P07498 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CSN3P07498 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSN3P07498 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSN3P07498 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CSN3P07498 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CSN3P07498 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CSN3P07498 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.09□□□□□ -0.31
CSN3P07498 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
CSN3P07498 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSN3P07498 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSN3P07498 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSN3P07498 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.09□□□□□ -0.31
CSN3P07498 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.09□□□□□ -0.31
CSN3P07498 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.09□□□□□ -0.31
CSN3P07498 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.09□□□□□ -0.31
CSN3P07498 PTCHD3P3-201ENST00000403073 906 ntBASIC13.09□□□□□ -0.31
CSN3P07498 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.09□□□□□ -0.31
CSN3P07498 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.09□□□□□ -0.31
CSN3P07498 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.09□□□□□ -0.31
CSN3P07498 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.09□□□□□ -0.31
CSN3P07498 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.09□□□□□ -0.31
CSN3P07498 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CSN3P07498 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.09□□□□□ -0.31
CSN3P07498 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.09□□□□□ -0.31
CSN3P07498 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.09□□□□□ -0.31
CSN3P07498 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSN3P07498 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSN3P07498 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.09□□□□□ -0.31
CSN3P07498 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.09□□□□□ -0.31
CSN3P07498 Z83851.2-201ENST00000609564 659 ntBASIC13.09□□□□□ -0.31
CSN3P07498 AL805961.1-202ENST00000641562 540 ntBASIC13.09□□□□□ -0.31
CSN3P07498 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSN3P07498 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSN3P07498 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSN3P07498 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSN3P07498 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSN3P07498 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSN3P07498 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CSN3P07498 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CSN3P07498 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CSN3P07498 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSN3P07498 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CSN3P07498 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
CSN3P07498 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSN3P07498 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CSN3P07498 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.08□□□□□ -0.31
CSN3P07498 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CSN3P07498 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.08□□□□□ -0.31
CSN3P07498 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CSN3P07498 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CSN3P07498 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSN3P07498 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CSN3P07498 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CSN3P07498 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSN3P07498 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CSN3P07498 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CSN3P07498 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSN3P07498 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.08□□□□□ -0.32
CSN3P07498 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSN3P07498 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSN3P07498 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.08□□□□□ -0.32
CSN3P07498 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSN3P07498 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CSN3P07498 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.08□□□□□ -0.32
CSN3P07498 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSN3P07498 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSN3P07498 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CSN3P07498 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CSN3P07498 AP002414.1-201ENST00000391405 1147 ntBASIC13.08□□□□□ -0.32
CSN3P07498 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CSN3P07498 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.08□□□□□ -0.32
CSN3P07498 AC009947.1-201ENST00000444350 727 ntBASIC13.08□□□□□ -0.32
CSN3P07498 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSN3P07498 AC008667.4-201ENST00000607370 168 ntBASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms