Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL1A1P02452 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.64■□□□□ 0.74
COL1A1P02452 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
COL1A1P02452 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
COL1A1P02452 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.64■□□□□ 0.74
COL1A1P02452 ALOX12P2-203ENST00000570921 1945 ntBASIC19.64■□□□□ 0.74
COL1A1P02452 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
COL1A1P02452 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC19.64■□□□□ 0.73
COL1A1P02452 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.64■□□□□ 0.73
COL1A1P02452 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL1A1P02452 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL1A1P02452 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.64■□□□□ 0.73
COL1A1P02452 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
COL1A1P02452 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
COL1A1P02452 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC19.64■□□□□ 0.73
COL1A1P02452 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.64■□□□□ 0.73
COL1A1P02452 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.64■□□□□ 0.73
COL1A1P02452 AC093004.1-201ENST00000508850 424 ntBASIC19.64■□□□□ 0.73
COL1A1P02452 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.64■□□□□ 0.73
COL1A1P02452 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL1A1P02452 AC135586.1-201ENST00000539323 574 ntBASIC19.64■□□□□ 0.73
COL1A1P02452 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL1A1P02452 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC19.64■□□□□ 0.73
COL1A1P02452 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL1A1P02452 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL1A1P02452 AC009053.2-201ENST00000563701 2365 ntBASIC19.64■□□□□ 0.73
COL1A1P02452 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL1A1P02452 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC19.64■□□□□ 0.73
COL1A1P02452 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC19.64■□□□□ 0.73
COL1A1P02452 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL1A1P02452 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL1A1P02452 AC007541.1-201ENST00000570282 1469 ntBASIC19.64■□□□□ 0.73
COL1A1P02452 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL1A1P02452 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.64■□□□□ 0.73
COL1A1P02452 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.64■□□□□ 0.73
COL1A1P02452 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL1A1P02452 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL1A1P02452 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL1A1P02452 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL1A1P02452 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.63■□□□□ 0.73
COL1A1P02452 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.63■□□□□ 0.73
COL1A1P02452 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC19.63■□□□□ 0.73
COL1A1P02452 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL1A1P02452 AL589987.1-201ENST00000453380 819 ntBASIC19.63■□□□□ 0.73
COL1A1P02452 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC19.63■□□□□ 0.73
COL1A1P02452 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.63■□□□□ 0.73
COL1A1P02452 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC19.63■□□□□ 0.73
COL1A1P02452 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.63■□□□□ 0.73
COL1A1P02452 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.63■□□□□ 0.73
COL1A1P02452 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.63■□□□□ 0.73
COL1A1P02452 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL1A1P02452 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL1A1P02452 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL1A1P02452 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL1A1P02452 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL1A1P02452 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.63■□□□□ 0.73
COL1A1P02452 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL1A1P02452 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL1A1P02452 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL1A1P02452 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL1A1P02452 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL1A1P02452 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL1A1P02452 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL1A1P02452 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL1A1P02452 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL1A1P02452 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
COL1A1P02452 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
COL1A1P02452 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC19.62■□□□□ 0.73
COL1A1P02452 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC19.62■□□□□ 0.73
COL1A1P02452 GNAQP1-201ENST00000444815 1067 ntBASIC19.62■□□□□ 0.73
COL1A1P02452 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.62■□□□□ 0.73
COL1A1P02452 HILS1-202ENST00000545329 423 ntBASIC19.62■□□□□ 0.73
COL1A1P02452 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.62■□□□□ 0.73
COL1A1P02452 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL1A1P02452 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.62■□□□□ 0.73
COL1A1P02452 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC19.62■□□□□ 0.73
COL1A1P02452 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC19.62■□□□□ 0.73
COL1A1P02452 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL1A1P02452 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL1A1P02452 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
COL1A1P02452 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL1A1P02452 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
COL1A1P02452 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
COL1A1P02452 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL1A1P02452 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL1A1P02452 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL1A1P02452 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
COL1A1P02452 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.62■□□□□ 0.73
COL1A1P02452 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.61■□□□□ 0.73
COL1A1P02452 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.61■□□□□ 0.73
COL1A1P02452 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL1A1P02452 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL1A1P02452 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL1A1P02452 AC079776.1-201ENST00000401540 1152 ntBASIC19.61■□□□□ 0.73
COL1A1P02452 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.61■□□□□ 0.73
COL1A1P02452 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.61■□□□□ 0.73
COL1A1P02452 AC114501.2-201ENST00000439631 535 ntBASIC19.61■□□□□ 0.73
COL1A1P02452 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC19.61■□□□□ 0.73
COL1A1P02452 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL1A1P02452 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms