Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.98■□□□□ 0.31
TOP3BO95985 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TOP3BO95985 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TOP3BO95985 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TOP3BO95985 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.97■□□□□ 0.31
TOP3BO95985 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
TOP3BO95985 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.97■□□□□ 0.31
TOP3BO95985 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOP3BO95985 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.97■□□□□ 0.31
TOP3BO95985 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOP3BO95985 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.97■□□□□ 0.31
TOP3BO95985 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.97■□□□□ 0.31
TOP3BO95985 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOP3BO95985 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOP3BO95985 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOP3BO95985 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOP3BO95985 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOP3BO95985 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOP3BO95985 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOP3BO95985 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TOP3BO95985 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOP3BO95985 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
TOP3BO95985 AC003669.1-201ENST00000334569 611 ntBASIC16.97■□□□□ 0.31
TOP3BO95985 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TOP3BO95985 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.97■□□□□ 0.31
TOP3BO95985 MIR661-201ENST00000384842 89 ntBASIC16.97■□□□□ 0.31
TOP3BO95985 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TOP3BO95985 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOP3BO95985 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.97■□□□□ 0.31
TOP3BO95985 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TOP3BO95985 MEIS3P1-201ENST00000495167 958 ntBASIC16.97■□□□□ 0.31
TOP3BO95985 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.97■□□□□ 0.31
TOP3BO95985 IGHV3-65-201ENST00000523210 341 ntBASIC16.97■□□□□ 0.31
TOP3BO95985 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.97■□□□□ 0.31
TOP3BO95985 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.97■□□□□ 0.31
TOP3BO95985 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.97■□□□□ 0.31
TOP3BO95985 AC091812.2-201ENST00000619081 385 ntBASIC16.97■□□□□ 0.31
TOP3BO95985 LINC00628-201ENST00000628516 1289 ntBASIC16.97■□□□□ 0.31
TOP3BO95985 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TOP3BO95985 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOP3BO95985 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.97■□□□□ 0.31
TOP3BO95985 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.97■□□□□ 0.31
TOP3BO95985 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOP3BO95985 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.97■□□□□ 0.31
TOP3BO95985 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOP3BO95985 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.97■□□□□ 0.31
TOP3BO95985 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOP3BO95985 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TOP3BO95985 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOP3BO95985 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.97■□□□□ 0.31
TOP3BO95985 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOP3BO95985 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.97■□□□□ 0.31
TOP3BO95985 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TOP3BO95985 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TOP3BO95985 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TOP3BO95985 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TOP3BO95985 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.96■□□□□ 0.31
TOP3BO95985 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TOP3BO95985 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TOP3BO95985 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
TOP3BO95985 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TOP3BO95985 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TOP3BO95985 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TOP3BO95985 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TOP3BO95985 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TOP3BO95985 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TOP3BO95985 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.96■□□□□ 0.31
TOP3BO95985 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TOP3BO95985 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TOP3BO95985 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TOP3BO95985 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TOP3BO95985 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TOP3BO95985 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.96■□□□□ 0.31
TOP3BO95985 RPS15P9-201ENST00000494093 319 ntBASIC16.96■□□□□ 0.31
TOP3BO95985 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.96■□□□□ 0.31
TOP3BO95985 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.96■□□□□ 0.31
TOP3BO95985 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TOP3BO95985 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.96■□□□□ 0.31
TOP3BO95985 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.96■□□□□ 0.31
TOP3BO95985 AC105339.1-204ENST00000636249 355 ntBASIC16.96■□□□□ 0.31
TOP3BO95985 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TOP3BO95985 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TOP3BO95985 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TOP3BO95985 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TOP3BO95985 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TOP3BO95985 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.96■□□□□ 0.31
TOP3BO95985 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TOP3BO95985 LINC00554-201ENST00000564841 3011 ntBASIC16.96■□□□□ 0.3
TOP3BO95985 CYP2T1P-202ENST00000641596 2535 ntBASIC16.96■□□□□ 0.3
TOP3BO95985 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TOP3BO95985 AC007950.2-201ENST00000615045 2347 ntBASIC16.96■□□□□ 0.3
TOP3BO95985 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.96■□□□□ 0.3
TOP3BO95985 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.96■□□□□ 0.3
TOP3BO95985 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
TOP3BO95985 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
TOP3BO95985 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TOP3BO95985 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
TOP3BO95985 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TOP3BO95985 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
TOP3BO95985 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms