Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.48■□□□□ 0.55
GGPS1O95749 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
GGPS1O95749 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GGPS1O95749 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
GGPS1O95749 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.48■□□□□ 0.55
GGPS1O95749 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GGPS1O95749 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GGPS1O95749 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
GGPS1O95749 GPAA1P2-202ENST00000606848 1787 ntBASIC18.47■□□□□ 0.55
GGPS1O95749 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.47■□□□□ 0.55
GGPS1O95749 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
GGPS1O95749 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
GGPS1O95749 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GGPS1O95749 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.47■□□□□ 0.55
GGPS1O95749 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.47■□□□□ 0.55
GGPS1O95749 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GGPS1O95749 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GGPS1O95749 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
GGPS1O95749 AL035456.1-201ENST00000456064 1369 ntBASIC18.47■□□□□ 0.55
GGPS1O95749 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.47■□□□□ 0.55
GGPS1O95749 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GGPS1O95749 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GGPS1O95749 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GGPS1O95749 TSSK5P-201ENST00000423978 907 ntBASIC18.47■□□□□ 0.55
GGPS1O95749 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.47■□□□□ 0.55
GGPS1O95749 MTND6P24-201ENST00000440466 518 ntBASIC18.47■□□□□ 0.55
GGPS1O95749 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
GGPS1O95749 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
GGPS1O95749 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.47■□□□□ 0.55
GGPS1O95749 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
GGPS1O95749 LINC02560-201ENST00000596379 459 ntBASIC18.47■□□□□ 0.55
GGPS1O95749 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.47■□□□□ 0.55
GGPS1O95749 AC020765.3-201ENST00000613051 740 ntBASIC18.47■□□□□ 0.55
GGPS1O95749 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.47■□□□□ 0.55
GGPS1O95749 AC008761.3-201ENST00000624803 892 ntBASIC18.47■□□□□ 0.55
GGPS1O95749 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
GGPS1O95749 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.47■□□□□ 0.55
GGPS1O95749 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GGPS1O95749 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.47■□□□□ 0.55
GGPS1O95749 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
GGPS1O95749 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.47■□□□□ 0.55
GGPS1O95749 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GGPS1O95749 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
GGPS1O95749 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GGPS1O95749 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
GGPS1O95749 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
GGPS1O95749 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GGPS1O95749 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GGPS1O95749 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GGPS1O95749 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.46■□□□□ 0.55
GGPS1O95749 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.46■□□□□ 0.55
GGPS1O95749 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
GGPS1O95749 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GGPS1O95749 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GGPS1O95749 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GGPS1O95749 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.46■□□□□ 0.55
GGPS1O95749 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GGPS1O95749 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GGPS1O95749 AC005915.1-201ENST00000624912 2018 ntBASIC18.46■□□□□ 0.55
GGPS1O95749 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.46■□□□□ 0.55
GGPS1O95749 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GGPS1O95749 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GGPS1O95749 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GGPS1O95749 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.46■□□□□ 0.55
GGPS1O95749 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.46■□□□□ 0.55
GGPS1O95749 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
GGPS1O95749 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GGPS1O95749 MRPS18AP1-201ENST00000414458 589 ntBASIC18.46■□□□□ 0.55
GGPS1O95749 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.46■□□□□ 0.55
GGPS1O95749 FAM207CP-201ENST00000443486 507 ntBASIC18.46■□□□□ 0.55
GGPS1O95749 AC093724.1-201ENST00000448659 1027 ntBASIC18.46■□□□□ 0.55
GGPS1O95749 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.46■□□□□ 0.55
GGPS1O95749 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GGPS1O95749 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GGPS1O95749 HLA-V-204ENST00000476601 1289 ntBASIC18.46■□□□□ 0.55
GGPS1O95749 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
GGPS1O95749 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
GGPS1O95749 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.46■□□□□ 0.55
GGPS1O95749 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.46■□□□□ 0.55
GGPS1O95749 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.46■□□□□ 0.55
GGPS1O95749 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.46■□□□□ 0.55
GGPS1O95749 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.46■□□□□ 0.55
GGPS1O95749 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.46■□□□□ 0.55
GGPS1O95749 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
GGPS1O95749 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GGPS1O95749 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.46■□□□□ 0.55
GGPS1O95749 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
GGPS1O95749 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GGPS1O95749 GGT4P-201ENST00000623672 1708 ntBASIC18.46■□□□□ 0.55
GGPS1O95749 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
GGPS1O95749 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.46■□□□□ 0.55
GGPS1O95749 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
GGPS1O95749 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GGPS1O95749 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GGPS1O95749 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
GGPS1O95749 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.46■□□□□ 0.54
GGPS1O95749 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
GGPS1O95749 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GGPS1O95749 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
GGPS1O95749 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms