Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
VAPBO95292 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAPBO95292 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
VAPBO95292 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.65■□□□□ 0.26
VAPBO95292 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAPBO95292 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
VAPBO95292 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAPBO95292 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
VAPBO95292 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VAPBO95292 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.65■□□□□ 0.26
VAPBO95292 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
VAPBO95292 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAPBO95292 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VAPBO95292 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
VAPBO95292 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
VAPBO95292 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
VAPBO95292 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
VAPBO95292 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
VAPBO95292 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAPBO95292 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.64■□□□□ 0.25
VAPBO95292 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAPBO95292 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAPBO95292 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
VAPBO95292 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VAPBO95292 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAPBO95292 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAPBO95292 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
VAPBO95292 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VAPBO95292 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAPBO95292 TPM4P1-201ENST00000436100 807 ntBASIC16.64■□□□□ 0.25
VAPBO95292 VN2R19P-201ENST00000442399 1052 ntBASIC16.64■□□□□ 0.25
VAPBO95292 AL513480.1-201ENST00000451731 511 ntBASIC16.64■□□□□ 0.25
VAPBO95292 AC009078.2-202ENST00000463353 338 ntBASIC16.64■□□□□ 0.25
VAPBO95292 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.64■□□□□ 0.25
VAPBO95292 RNA5SP415-201ENST00000517246 115 ntBASIC16.64■□□□□ 0.25
VAPBO95292 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.64■□□□□ 0.25
VAPBO95292 AL662844.1-201ENST00000546340 181 ntBASIC16.64■□□□□ 0.25
VAPBO95292 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.64■□□□□ 0.25
VAPBO95292 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.64■□□□□ 0.25
VAPBO95292 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.64■□□□□ 0.25
VAPBO95292 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAPBO95292 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
VAPBO95292 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAPBO95292 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VAPBO95292 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.64■□□□□ 0.25
VAPBO95292 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAPBO95292 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
VAPBO95292 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.64■□□□□ 0.25
VAPBO95292 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VAPBO95292 LINC01144-201ENST00000626198 1710 ntBASIC16.64■□□□□ 0.25
VAPBO95292 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
VAPBO95292 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.64■□□□□ 0.25
VAPBO95292 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
VAPBO95292 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
VAPBO95292 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.64■□□□□ 0.25
VAPBO95292 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
VAPBO95292 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
VAPBO95292 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.64■□□□□ 0.25
VAPBO95292 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
VAPBO95292 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VAPBO95292 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VAPBO95292 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VAPBO95292 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.63■□□□□ 0.25
VAPBO95292 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VAPBO95292 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VAPBO95292 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
VAPBO95292 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VAPBO95292 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
VAPBO95292 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VAPBO95292 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
VAPBO95292 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
VAPBO95292 CRYGEP-201ENST00000412192 528 ntBASIC16.63■□□□□ 0.25
VAPBO95292 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.63■□□□□ 0.25
VAPBO95292 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.63■□□□□ 0.25
VAPBO95292 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.63■□□□□ 0.25
VAPBO95292 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.63■□□□□ 0.25
VAPBO95292 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
VAPBO95292 IGHV3-22-201ENST00000520721 359 ntBASIC16.63■□□□□ 0.25
VAPBO95292 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
VAPBO95292 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VAPBO95292 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
VAPBO95292 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
VAPBO95292 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VAPBO95292 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
VAPBO95292 HLA-A-201ENST00000376802 1334 ntBASIC16.63■□□□□ 0.25
VAPBO95292 AC007950.2-201ENST00000615045 2347 ntBASIC16.63■□□□□ 0.25
VAPBO95292 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VAPBO95292 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.63■□□□□ 0.25
VAPBO95292 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.63■□□□□ 0.25
VAPBO95292 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
VAPBO95292 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
VAPBO95292 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VAPBO95292 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VAPBO95292 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VAPBO95292 AL596087.1-201ENST00000400979 1969 ntBASIC16.62■□□□□ 0.25
VAPBO95292 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
VAPBO95292 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VAPBO95292 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
VAPBO95292 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VAPBO95292 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms