Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTN3O95197 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTN3O95197 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RTN3O95197 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
RTN3O95197 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RTN3O95197 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RTN3O95197 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.42■□□□□ 0.38
RTN3O95197 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTN3O95197 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.42■□□□□ 0.38
RTN3O95197 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTN3O95197 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.42■□□□□ 0.38
RTN3O95197 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTN3O95197 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.42■□□□□ 0.38
RTN3O95197 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.42■□□□□ 0.38
RTN3O95197 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
RTN3O95197 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTN3O95197 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.42■□□□□ 0.38
RTN3O95197 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTN3O95197 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.42■□□□□ 0.38
RTN3O95197 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RTN3O95197 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.42■□□□□ 0.38
RTN3O95197 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTN3O95197 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTN3O95197 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RTN3O95197 AP000842.3-202ENST00000569238 1080 ntBASIC17.42■□□□□ 0.38
RTN3O95197 AC027796.2-201ENST00000575326 344 ntBASIC17.42■□□□□ 0.38
RTN3O95197 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.42■□□□□ 0.38
RTN3O95197 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.42■□□□□ 0.38
RTN3O95197 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.42■□□□□ 0.38
RTN3O95197 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
RTN3O95197 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTN3O95197 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RTN3O95197 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
RTN3O95197 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTN3O95197 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTN3O95197 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTN3O95197 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTN3O95197 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTN3O95197 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTN3O95197 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.42■□□□□ 0.38
RTN3O95197 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.42■□□□□ 0.38
RTN3O95197 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTN3O95197 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTN3O95197 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTN3O95197 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTN3O95197 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTN3O95197 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTN3O95197 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTN3O95197 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RTN3O95197 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RTN3O95197 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RTN3O95197 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTN3O95197 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTN3O95197 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RTN3O95197 MIR346-201ENST00000362234 95 ntBASIC17.41■□□□□ 0.38
RTN3O95197 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.41■□□□□ 0.38
RTN3O95197 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.41■□□□□ 0.38
RTN3O95197 FAM58DP-201ENST00000428076 619 ntBASIC17.41■□□□□ 0.38
RTN3O95197 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.41■□□□□ 0.38
RTN3O95197 AC105233.2-201ENST00000523697 349 ntBASIC17.41■□□□□ 0.38
RTN3O95197 AC109322.1-201ENST00000524499 1264 ntBASIC17.41■□□□□ 0.38
RTN3O95197 AF228730.5-201ENST00000530288 346 ntBASIC17.41■□□□□ 0.38
RTN3O95197 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.41■□□□□ 0.38
RTN3O95197 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.41■□□□□ 0.38
RTN3O95197 AC093028.1-201ENST00000622998 982 ntBASIC17.41■□□□□ 0.38
RTN3O95197 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.41■□□□□ 0.38
RTN3O95197 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTN3O95197 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RTN3O95197 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTN3O95197 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RTN3O95197 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTN3O95197 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTN3O95197 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTN3O95197 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTN3O95197 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTN3O95197 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.41■□□□□ 0.38
RTN3O95197 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTN3O95197 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTN3O95197 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTN3O95197 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.4■□□□□ 0.38
RTN3O95197 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.4■□□□□ 0.38
RTN3O95197 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN3O95197 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RTN3O95197 PCDHB19P-201ENST00000570871 2371 ntBASIC17.4■□□□□ 0.38
RTN3O95197 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN3O95197 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.4■□□□□ 0.38
RTN3O95197 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN3O95197 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
RTN3O95197 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTN3O95197 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN3O95197 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN3O95197 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN3O95197 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RTN3O95197 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.4■□□□□ 0.38
RTN3O95197 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN3O95197 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN3O95197 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RTN3O95197 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RTN3O95197 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.4■□□□□ 0.38
RTN3O95197 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms