Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.08■□□□□ 0
CLPXO76031 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLPXO76031 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.08■□□□□ 0
CLPXO76031 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.08■□□□□ 0
CLPXO76031 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLPXO76031 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CLPXO76031 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLPXO76031 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.08■□□□□ 0
CLPXO76031 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.08■□□□□ 0
CLPXO76031 PCED1CP-201ENST00000419887 785 ntBASIC15.08■□□□□ 0
CLPXO76031 FAM86EP-206ENST00000510506 987 ntBASIC15.08■□□□□ 0
CLPXO76031 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.08■□□□□ 0
CLPXO76031 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLPXO76031 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.08■□□□□ 0
CLPXO76031 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.08■□□□□ 0
CLPXO76031 AL157888.1-201ENST00000631930 593 ntBASIC15.08■□□□□ 0
CLPXO76031 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLPXO76031 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLPXO76031 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLPXO76031 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLPXO76031 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLPXO76031 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLPXO76031 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CLPXO76031 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.08■□□□□ 0
CLPXO76031 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
CLPXO76031 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.08■□□□□ 0
CLPXO76031 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLPXO76031 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
CLPXO76031 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CLPXO76031 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.08■□□□□ 0
CLPXO76031 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.08■□□□□ 0
CLPXO76031 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.08■□□□□ 0
CLPXO76031 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLPXO76031 AC006449.6-201ENST00000612330 2296 ntBASIC15.08■□□□□ 0
CLPXO76031 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
CLPXO76031 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CLPXO76031 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLPXO76031 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.08■□□□□ 0
CLPXO76031 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLPXO76031 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.07■□□□□ 0
CLPXO76031 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLPXO76031 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CLPXO76031 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CLPXO76031 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CLPXO76031 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLPXO76031 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.07■□□□□ 0
CLPXO76031 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CLPXO76031 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLPXO76031 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.07■□□□□ 0
CLPXO76031 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CLPXO76031 SSR4P1-203ENST00000599569 2260 ntBASIC15.07■□□□□ 0
CLPXO76031 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.07■□□□□ 0
CLPXO76031 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.07■□□□□ 0
CLPXO76031 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.07■□□□□ 0
CLPXO76031 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.07■□□□□ 0
CLPXO76031 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.07■□□□□ 0
CLPXO76031 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.07■□□□□ 0
CLPXO76031 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLPXO76031 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.07■□□□□ 0
CLPXO76031 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.07■□□□□ 0
CLPXO76031 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLPXO76031 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.07■□□□□ 0
CLPXO76031 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLPXO76031 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLPXO76031 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CLPXO76031 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CLPXO76031 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLPXO76031 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLPXO76031 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLPXO76031 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.07■□□□□ 0
CLPXO76031 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLPXO76031 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
CLPXO76031 CICP14-201ENST00000629111 2732 ntBASIC15.07■□□□□ 0
CLPXO76031 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CLPXO76031 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLPXO76031 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CLPXO76031 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CLPXO76031 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLPXO76031 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLPXO76031 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.06■□□□□ 0
CLPXO76031 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLPXO76031 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CLPXO76031 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLPXO76031 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.06■□□□□ 0
CLPXO76031 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLPXO76031 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLPXO76031 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLPXO76031 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLPXO76031 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLPXO76031 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CLPXO76031 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLPXO76031 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CLPXO76031 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.06■□□□□ 0
CLPXO76031 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLPXO76031 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CLPXO76031 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLPXO76031 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLPXO76031 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
CLPXO76031 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.06■□□□□ 0
CLPXO76031 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms