Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFS3O75489 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFS3O75489 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFS3O75489 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFS3O75489 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFS3O75489 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFS3O75489 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFS3O75489 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
NDUFS3O75489 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFS3O75489 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.49■□□□□ 0.23
NDUFS3O75489 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFS3O75489 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.49■□□□□ 0.23
NDUFS3O75489 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.49■□□□□ 0.23
NDUFS3O75489 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFS3O75489 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.49■□□□□ 0.23
NDUFS3O75489 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
NDUFS3O75489 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFS3O75489 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.49■□□□□ 0.23
NDUFS3O75489 PMS2P4-201ENST00000412466 1052 ntBASIC16.49■□□□□ 0.23
NDUFS3O75489 AC026396.1-201ENST00000419388 421 ntBASIC16.49■□□□□ 0.23
NDUFS3O75489 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.49■□□□□ 0.23
NDUFS3O75489 AC007967.2-201ENST00000432613 625 ntBASIC16.49■□□□□ 0.23
NDUFS3O75489 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.49■□□□□ 0.23
NDUFS3O75489 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFS3O75489 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.49■□□□□ 0.23
NDUFS3O75489 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.49■□□□□ 0.23
NDUFS3O75489 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.49■□□□□ 0.23
NDUFS3O75489 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
NDUFS3O75489 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NDUFS3O75489 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NDUFS3O75489 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.49■□□□□ 0.23
NDUFS3O75489 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.49■□□□□ 0.23
NDUFS3O75489 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.49■□□□□ 0.23
NDUFS3O75489 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
NDUFS3O75489 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFS3O75489 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFS3O75489 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
NDUFS3O75489 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.48■□□□□ 0.23
NDUFS3O75489 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFS3O75489 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFS3O75489 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
NDUFS3O75489 BCAR1-209ENST00000546196 1340 ntBASIC16.48■□□□□ 0.23
NDUFS3O75489 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.48■□□□□ 0.23
NDUFS3O75489 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFS3O75489 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFS3O75489 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.48■□□□□ 0.23
NDUFS3O75489 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFS3O75489 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFS3O75489 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFS3O75489 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFS3O75489 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFS3O75489 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
NDUFS3O75489 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
NDUFS3O75489 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFS3O75489 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.48■□□□□ 0.23
NDUFS3O75489 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
NDUFS3O75489 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFS3O75489 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.48■□□□□ 0.23
NDUFS3O75489 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.48■□□□□ 0.23
NDUFS3O75489 AC120114.3-201ENST00000611923 658 ntBASIC16.48■□□□□ 0.23
NDUFS3O75489 BX640515.1-201ENST00000617215 977 ntBASIC16.48■□□□□ 0.23
NDUFS3O75489 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.48■□□□□ 0.23
NDUFS3O75489 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.48■□□□□ 0.23
NDUFS3O75489 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFS3O75489 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFS3O75489 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFS3O75489 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NDUFS3O75489 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
NDUFS3O75489 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.48■□□□□ 0.23
NDUFS3O75489 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
NDUFS3O75489 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.48■□□□□ 0.23
NDUFS3O75489 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
NDUFS3O75489 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.48■□□□□ 0.23
NDUFS3O75489 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
NDUFS3O75489 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NDUFS3O75489 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFS3O75489 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NDUFS3O75489 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.47■□□□□ 0.23
NDUFS3O75489 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFS3O75489 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFS3O75489 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
NDUFS3O75489 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFS3O75489 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
NDUFS3O75489 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFS3O75489 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFS3O75489 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFS3O75489 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFS3O75489 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
NDUFS3O75489 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.47■□□□□ 0.23
NDUFS3O75489 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFS3O75489 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFS3O75489 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFS3O75489 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
NDUFS3O75489 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.47■□□□□ 0.23
NDUFS3O75489 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFS3O75489 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFS3O75489 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFS3O75489 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NDUFS3O75489 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.47■□□□□ 0.23
NDUFS3O75489 POU5F1P6-201ENST00000466990 990 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms