Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SUPT3HO75486 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SUPT3HO75486 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.47■□□□□ 0.23
SUPT3HO75486 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SUPT3HO75486 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SUPT3HO75486 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SUPT3HO75486 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SUPT3HO75486 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SUPT3HO75486 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SUPT3HO75486 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SUPT3HO75486 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SUPT3HO75486 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SUPT3HO75486 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SUPT3HO75486 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SUPT3HO75486 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.46■□□□□ 0.23
SUPT3HO75486 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SUPT3HO75486 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SUPT3HO75486 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.46■□□□□ 0.23
SUPT3HO75486 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SUPT3HO75486 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SUPT3HO75486 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SUPT3HO75486 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.46■□□□□ 0.23
SUPT3HO75486 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.46■□□□□ 0.23
SUPT3HO75486 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SUPT3HO75486 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SUPT3HO75486 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SUPT3HO75486 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SUPT3HO75486 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
SUPT3HO75486 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SUPT3HO75486 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SUPT3HO75486 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.46■□□□□ 0.23
SUPT3HO75486 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.46■□□□□ 0.23
SUPT3HO75486 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.46■□□□□ 0.23
SUPT3HO75486 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.46■□□□□ 0.23
SUPT3HO75486 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SUPT3HO75486 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SUPT3HO75486 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.46■□□□□ 0.23
SUPT3HO75486 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.46■□□□□ 0.23
SUPT3HO75486 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.46■□□□□ 0.23
SUPT3HO75486 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.46■□□□□ 0.23
SUPT3HO75486 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SUPT3HO75486 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
SUPT3HO75486 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SUPT3HO75486 AC107918.4-202ENST00000641623 219 ntBASIC16.46■□□□□ 0.23
SUPT3HO75486 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
SUPT3HO75486 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SUPT3HO75486 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SUPT3HO75486 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.46■□□□□ 0.23
SUPT3HO75486 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.46■□□□□ 0.23
SUPT3HO75486 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SUPT3HO75486 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SUPT3HO75486 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SUPT3HO75486 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SUPT3HO75486 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
SUPT3HO75486 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SUPT3HO75486 AL671710.1-201ENST00000610245 2349 ntBASIC16.46■□□□□ 0.23
SUPT3HO75486 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.46■□□□□ 0.23
SUPT3HO75486 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SUPT3HO75486 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SUPT3HO75486 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SUPT3HO75486 ME2P1-201ENST00000426028 1970 ntBASIC16.46■□□□□ 0.22
SUPT3HO75486 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SUPT3HO75486 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SUPT3HO75486 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SUPT3HO75486 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SUPT3HO75486 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.45■□□□□ 0.22
SUPT3HO75486 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.45■□□□□ 0.22
SUPT3HO75486 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.45■□□□□ 0.22
SUPT3HO75486 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SUPT3HO75486 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SUPT3HO75486 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SUPT3HO75486 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SUPT3HO75486 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
SUPT3HO75486 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SUPT3HO75486 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SUPT3HO75486 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SUPT3HO75486 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SUPT3HO75486 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SUPT3HO75486 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SUPT3HO75486 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SUPT3HO75486 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SUPT3HO75486 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SUPT3HO75486 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SUPT3HO75486 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SUPT3HO75486 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.45■□□□□ 0.22
SUPT3HO75486 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SUPT3HO75486 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.45■□□□□ 0.22
SUPT3HO75486 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SUPT3HO75486 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.45■□□□□ 0.22
SUPT3HO75486 SLC25A6P2-201ENST00000497974 877 ntBASIC16.45■□□□□ 0.22
SUPT3HO75486 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SUPT3HO75486 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.45■□□□□ 0.22
SUPT3HO75486 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SUPT3HO75486 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
SUPT3HO75486 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.45■□□□□ 0.22
SUPT3HO75486 REXO1L3P-201ENST00000622202 1288 ntBASIC16.45■□□□□ 0.22
SUPT3HO75486 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.45■□□□□ 0.22
SUPT3HO75486 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SUPT3HO75486 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SUPT3HO75486 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms