Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
ZIC3O60481 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.82□□□□□ -0.04
ZIC3O60481 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.82□□□□□ -0.04
ZIC3O60481 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.82□□□□□ -0.04
ZIC3O60481 POU5F1P6-201ENST00000466990 990 ntBASIC14.82□□□□□ -0.04
ZIC3O60481 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.82□□□□□ -0.04
ZIC3O60481 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.82□□□□□ -0.04
ZIC3O60481 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.82□□□□□ -0.04
ZIC3O60481 AC069262.1-201ENST00000539058 672 ntBASIC14.82□□□□□ -0.04
ZIC3O60481 RARRES2P9-201ENST00000565168 469 ntBASIC14.82□□□□□ -0.04
ZIC3O60481 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.82□□□□□ -0.04
ZIC3O60481 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.82□□□□□ -0.04
ZIC3O60481 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.82□□□□□ -0.04
ZIC3O60481 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ZIC3O60481 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
ZIC3O60481 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZIC3O60481 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.82□□□□□ -0.04
ZIC3O60481 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZIC3O60481 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
ZIC3O60481 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZIC3O60481 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZIC3O60481 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ZIC3O60481 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ZIC3O60481 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
ZIC3O60481 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.82□□□□□ -0.04
ZIC3O60481 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.82□□□□□ -0.04
ZIC3O60481 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
ZIC3O60481 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
ZIC3O60481 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
ZIC3O60481 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ZIC3O60481 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ZIC3O60481 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
ZIC3O60481 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.81□□□□□ -0.04
ZIC3O60481 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.81□□□□□ -0.04
ZIC3O60481 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC3O60481 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC3O60481 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC3O60481 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC3O60481 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC3O60481 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
ZIC3O60481 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC3O60481 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
ZIC3O60481 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.81□□□□□ -0.04
ZIC3O60481 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC3O60481 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC3O60481 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC3O60481 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC3O60481 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC3O60481 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC3O60481 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC3O60481 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.81□□□□□ -0.04
ZIC3O60481 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.81□□□□□ -0.04
ZIC3O60481 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.81□□□□□ -0.04
ZIC3O60481 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.81□□□□□ -0.04
ZIC3O60481 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC3O60481 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.81□□□□□ -0.04
ZIC3O60481 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.81□□□□□ -0.04
ZIC3O60481 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC3O60481 Z92544.3-201ENST00000624747 417 ntBASIC14.81□□□□□ -0.04
ZIC3O60481 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.81□□□□□ -0.04
ZIC3O60481 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC3O60481 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
ZIC3O60481 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
ZIC3O60481 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC3O60481 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.81□□□□□ -0.04
ZIC3O60481 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
ZIC3O60481 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC3O60481 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC3O60481 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.81□□□□□ -0.04
ZIC3O60481 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC3O60481 AC008677.1-201ENST00000519230 1561 ntBASIC14.81□□□□□ -0.04
ZIC3O60481 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ZIC3O60481 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC3O60481 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC3O60481 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC3O60481 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC3O60481 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC3O60481 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ZIC3O60481 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.8□□□□□ -0.04
ZIC3O60481 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC3O60481 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.8□□□□□ -0.04
ZIC3O60481 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC3O60481 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC3O60481 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.8□□□□□ -0.04
ZIC3O60481 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC3O60481 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC3O60481 HLA-H-201ENST00000383620 1096 ntBASIC14.8□□□□□ -0.04
ZIC3O60481 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.8□□□□□ -0.04
ZIC3O60481 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.8□□□□□ -0.04
ZIC3O60481 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.8□□□□□ -0.04
ZIC3O60481 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.8□□□□□ -0.04
ZIC3O60481 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.8□□□□□ -0.04
ZIC3O60481 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.8□□□□□ -0.04
ZIC3O60481 AC027796.2-201ENST00000575326 344 ntBASIC14.8□□□□□ -0.04
ZIC3O60481 AC015911.4-201ENST00000588022 1070 ntBASIC14.8□□□□□ -0.04
ZIC3O60481 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ZIC3O60481 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.8□□□□□ -0.04
ZIC3O60481 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.8□□□□□ -0.04
ZIC3O60481 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZIC3O60481 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms