Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PEX1O43933 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PEX1O43933 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.19■□□□□ 0.18
PEX1O43933 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PEX1O43933 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PEX1O43933 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PEX1O43933 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PEX1O43933 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PEX1O43933 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
PEX1O43933 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.19■□□□□ 0.18
PEX1O43933 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PEX1O43933 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PEX1O43933 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PEX1O43933 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.19■□□□□ 0.18
PEX1O43933 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PEX1O43933 ME2P1-201ENST00000426028 1970 ntBASIC16.19■□□□□ 0.18
PEX1O43933 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.19■□□□□ 0.18
PEX1O43933 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PEX1O43933 AC010460.3-201ENST00000511359 1579 ntBASIC16.19■□□□□ 0.18
PEX1O43933 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.19■□□□□ 0.18
PEX1O43933 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PEX1O43933 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PEX1O43933 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PEX1O43933 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.19■□□□□ 0.18
PEX1O43933 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PEX1O43933 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.19■□□□□ 0.18
PEX1O43933 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.19■□□□□ 0.18
PEX1O43933 RNA5SP419-201ENST00000515908 135 ntBASIC16.19■□□□□ 0.18
PEX1O43933 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PEX1O43933 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.19■□□□□ 0.18
PEX1O43933 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.19■□□□□ 0.18
PEX1O43933 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.19■□□□□ 0.18
PEX1O43933 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.19■□□□□ 0.18
PEX1O43933 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.19■□□□□ 0.18
PEX1O43933 AC120114.3-201ENST00000611923 658 ntBASIC16.19■□□□□ 0.18
PEX1O43933 BX640515.1-201ENST00000617215 977 ntBASIC16.19■□□□□ 0.18
PEX1O43933 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.19■□□□□ 0.18
PEX1O43933 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
PEX1O43933 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.19■□□□□ 0.18
PEX1O43933 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PEX1O43933 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PEX1O43933 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PEX1O43933 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PEX1O43933 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PEX1O43933 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PEX1O43933 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PEX1O43933 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PEX1O43933 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PEX1O43933 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.19■□□□□ 0.18
PEX1O43933 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PEX1O43933 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
PEX1O43933 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PEX1O43933 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PEX1O43933 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.18■□□□□ 0.18
PEX1O43933 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PEX1O43933 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
PEX1O43933 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PEX1O43933 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PEX1O43933 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.18■□□□□ 0.18
PEX1O43933 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PEX1O43933 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.18■□□□□ 0.18
PEX1O43933 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PEX1O43933 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PEX1O43933 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PEX1O43933 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.18■□□□□ 0.18
PEX1O43933 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.18■□□□□ 0.18
PEX1O43933 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PEX1O43933 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PEX1O43933 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.18■□□□□ 0.18
PEX1O43933 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
PEX1O43933 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PEX1O43933 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PEX1O43933 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PEX1O43933 AC018712.1-201ENST00000455767 687 ntBASIC16.18■□□□□ 0.18
PEX1O43933 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PEX1O43933 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.18■□□□□ 0.18
PEX1O43933 AC122714.2-201ENST00000502787 707 ntBASIC16.18■□□□□ 0.18
PEX1O43933 AP002490.2-201ENST00000524791 560 ntBASIC16.18■□□□□ 0.18
PEX1O43933 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.18■□□□□ 0.18
PEX1O43933 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PEX1O43933 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.18■□□□□ 0.18
PEX1O43933 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.18■□□□□ 0.18
PEX1O43933 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.18■□□□□ 0.18
PEX1O43933 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PEX1O43933 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PEX1O43933 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PEX1O43933 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PEX1O43933 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PEX1O43933 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PEX1O43933 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.18■□□□□ 0.18
PEX1O43933 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PEX1O43933 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PEX1O43933 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PEX1O43933 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.18■□□□□ 0.18
PEX1O43933 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PEX1O43933 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PEX1O43933 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PEX1O43933 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.18■□□□□ 0.18
PEX1O43933 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PEX1O43933 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms