Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.71■□□□□ 0.27
KDELR3O43731 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KDELR3O43731 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.71■□□□□ 0.27
KDELR3O43731 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.71■□□□□ 0.27
KDELR3O43731 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.71■□□□□ 0.27
KDELR3O43731 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.71■□□□□ 0.27
KDELR3O43731 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.71■□□□□ 0.27
KDELR3O43731 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.71■□□□□ 0.27
KDELR3O43731 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
KDELR3O43731 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.71■□□□□ 0.27
KDELR3O43731 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KDELR3O43731 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.71■□□□□ 0.27
KDELR3O43731 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.26
KDELR3O43731 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.7■□□□□ 0.26
KDELR3O43731 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.7■□□□□ 0.26
KDELR3O43731 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDELR3O43731 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.7■□□□□ 0.26
KDELR3O43731 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
KDELR3O43731 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDELR3O43731 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
KDELR3O43731 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDELR3O43731 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.7■□□□□ 0.26
KDELR3O43731 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDELR3O43731 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KDELR3O43731 AP3S2-216ENST00000617003 1561 ntBASIC16.7■□□□□ 0.26
KDELR3O43731 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDELR3O43731 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDELR3O43731 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.7■□□□□ 0.26
KDELR3O43731 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
KDELR3O43731 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KDELR3O43731 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.7■□□□□ 0.26
KDELR3O43731 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
KDELR3O43731 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KDELR3O43731 ALG1L8P-201ENST00000533887 760 ntBASIC16.7■□□□□ 0.26
KDELR3O43731 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.7■□□□□ 0.26
KDELR3O43731 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.7■□□□□ 0.26
KDELR3O43731 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.7■□□□□ 0.26
KDELR3O43731 LINC00628-201ENST00000628516 1289 ntBASIC16.7■□□□□ 0.26
KDELR3O43731 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDELR3O43731 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDELR3O43731 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDELR3O43731 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KDELR3O43731 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.7■□□□□ 0.26
KDELR3O43731 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KDELR3O43731 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
KDELR3O43731 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KDELR3O43731 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDELR3O43731 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
KDELR3O43731 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDELR3O43731 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
KDELR3O43731 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDELR3O43731 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDELR3O43731 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDELR3O43731 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDELR3O43731 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDELR3O43731 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KDELR3O43731 FAM220BP-201ENST00000377689 816 ntBASIC16.69■□□□□ 0.26
KDELR3O43731 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.69■□□□□ 0.26
KDELR3O43731 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KDELR3O43731 AC109322.1-201ENST00000524499 1264 ntBASIC16.69■□□□□ 0.26
KDELR3O43731 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.69■□□□□ 0.26
KDELR3O43731 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
KDELR3O43731 AC026150.2-201ENST00000564693 1156 ntBASIC16.69■□□□□ 0.26
KDELR3O43731 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.69■□□□□ 0.26
KDELR3O43731 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDELR3O43731 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.69■□□□□ 0.26
KDELR3O43731 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.69■□□□□ 0.26
KDELR3O43731 AP001059.3-201ENST00000619053 235 ntBASIC16.69■□□□□ 0.26
KDELR3O43731 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
KDELR3O43731 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDELR3O43731 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.69■□□□□ 0.26
KDELR3O43731 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDELR3O43731 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
KDELR3O43731 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KDELR3O43731 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
KDELR3O43731 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KDELR3O43731 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
KDELR3O43731 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDELR3O43731 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDELR3O43731 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.69■□□□□ 0.26
KDELR3O43731 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
KDELR3O43731 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.69■□□□□ 0.26
KDELR3O43731 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDELR3O43731 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
KDELR3O43731 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
KDELR3O43731 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
KDELR3O43731 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.68■□□□□ 0.26
KDELR3O43731 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.68■□□□□ 0.26
KDELR3O43731 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KDELR3O43731 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
KDELR3O43731 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KDELR3O43731 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KDELR3O43731 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KDELR3O43731 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KDELR3O43731 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KDELR3O43731 HLA-H-201ENST00000383620 1096 ntBASIC16.68■□□□□ 0.26
KDELR3O43731 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KDELR3O43731 AL512356.2-201ENST00000546955 174 ntBASIC16.68■□□□□ 0.26
KDELR3O43731 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KDELR3O43731 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms