Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ACTN4O43707 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ACTN4O43707 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
ACTN4O43707 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ACTN4O43707 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.53■□□□□ 0.56
ACTN4O43707 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.53■□□□□ 0.56
ACTN4O43707 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ACTN4O43707 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ACTN4O43707 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.52■□□□□ 0.56
ACTN4O43707 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ACTN4O43707 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ACTN4O43707 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
ACTN4O43707 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ACTN4O43707 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
ACTN4O43707 AC005622.1-201ENST00000636801 1703 ntBASIC18.52■□□□□ 0.56
ACTN4O43707 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ACTN4O43707 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.52■□□□□ 0.56
ACTN4O43707 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ACTN4O43707 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ACTN4O43707 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ACTN4O43707 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ACTN4O43707 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ACTN4O43707 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
ACTN4O43707 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ACTN4O43707 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.52■□□□□ 0.56
ACTN4O43707 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.52■□□□□ 0.56
ACTN4O43707 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
ACTN4O43707 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.52■□□□□ 0.56
ACTN4O43707 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.52■□□□□ 0.56
ACTN4O43707 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.52■□□□□ 0.56
ACTN4O43707 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.52■□□□□ 0.56
ACTN4O43707 AL031432.2-201ENST00000566714 459 ntBASIC18.52■□□□□ 0.56
ACTN4O43707 AL928711.1-201ENST00000570165 459 ntBASIC18.52■□□□□ 0.56
ACTN4O43707 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ACTN4O43707 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.52■□□□□ 0.56
ACTN4O43707 AC010507.1-201ENST00000633895 436 ntBASIC18.52■□□□□ 0.56
ACTN4O43707 AL645728.2-201ENST00000641974 660 ntBASIC18.52■□□□□ 0.56
ACTN4O43707 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ACTN4O43707 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ACTN4O43707 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.52■□□□□ 0.56
ACTN4O43707 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.52■□□□□ 0.56
ACTN4O43707 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ACTN4O43707 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
ACTN4O43707 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ACTN4O43707 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ACTN4O43707 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.52■□□□□ 0.55
ACTN4O43707 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.51■□□□□ 0.55
ACTN4O43707 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACTN4O43707 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACTN4O43707 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ACTN4O43707 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ACTN4O43707 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
ACTN4O43707 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACTN4O43707 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACTN4O43707 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.51■□□□□ 0.55
ACTN4O43707 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ACTN4O43707 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACTN4O43707 AL592424.1-201ENST00000563624 1536 ntBASIC18.51■□□□□ 0.55
ACTN4O43707 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ACTN4O43707 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACTN4O43707 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.51■□□□□ 0.55
ACTN4O43707 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACTN4O43707 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACTN4O43707 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ACTN4O43707 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.51■□□□□ 0.55
ACTN4O43707 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.51■□□□□ 0.55
ACTN4O43707 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.51■□□□□ 0.55
ACTN4O43707 AC009078.2-202ENST00000463353 338 ntBASIC18.51■□□□□ 0.55
ACTN4O43707 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.51■□□□□ 0.55
ACTN4O43707 NIFKP4-201ENST00000567275 1192 ntBASIC18.51■□□□□ 0.55
ACTN4O43707 AP001005.1-201ENST00000571755 1248 ntBASIC18.51■□□□□ 0.55
ACTN4O43707 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACTN4O43707 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.51■□□□□ 0.55
ACTN4O43707 AC021097.1-201ENST00000607902 574 ntBASIC18.51■□□□□ 0.55
ACTN4O43707 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC18.51■□□□□ 0.55
ACTN4O43707 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACTN4O43707 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
ACTN4O43707 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ACTN4O43707 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACTN4O43707 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.51■□□□□ 0.55
ACTN4O43707 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
ACTN4O43707 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACTN4O43707 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
ACTN4O43707 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
ACTN4O43707 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.51■□□□□ 0.55
ACTN4O43707 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.51■□□□□ 0.55
ACTN4O43707 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ACTN4O43707 AC105917.1-201ENST00000506637 2539 ntBASIC18.51■□□□□ 0.55
ACTN4O43707 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACTN4O43707 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACTN4O43707 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ACTN4O43707 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ACTN4O43707 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.51■□□□□ 0.55
ACTN4O43707 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACTN4O43707 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ACTN4O43707 HLA-A-201ENST00000376802 1334 ntBASIC18.5■□□□□ 0.55
ACTN4O43707 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACTN4O43707 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ACTN4O43707 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ACTN4O43707 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms