Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
KCNQ3O43525 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KCNQ3O43525 AC063926.2-201ENST00000623766 1308 ntBASIC21.01■□□□□ 0.95
KCNQ3O43525 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KCNQ3O43525 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KCNQ3O43525 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC21■□□□□ 0.95
KCNQ3O43525 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
KCNQ3O43525 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KCNQ3O43525 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
KCNQ3O43525 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC21■□□□□ 0.95
KCNQ3O43525 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC21■□□□□ 0.95
KCNQ3O43525 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KCNQ3O43525 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
KCNQ3O43525 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC21■□□□□ 0.95
KCNQ3O43525 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
KCNQ3O43525 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
KCNQ3O43525 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
KCNQ3O43525 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
KCNQ3O43525 GRAP-202ENST00000395635 834 ntTSL 2 BASIC21■□□□□ 0.95
KCNQ3O43525 RASL12-203ENST00000434605 982 ntTSL 2 BASIC21■□□□□ 0.95
KCNQ3O43525 AL589987.1-201ENST00000453380 819 ntBASIC21■□□□□ 0.95
KCNQ3O43525 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC21■□□□□ 0.95
KCNQ3O43525 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC21■□□□□ 0.95
KCNQ3O43525 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC21■□□□□ 0.95
KCNQ3O43525 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC21■□□□□ 0.95
KCNQ3O43525 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC21■□□□□ 0.95
KCNQ3O43525 AL132655.2-201ENST00000596276 594 ntBASIC21■□□□□ 0.95
KCNQ3O43525 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC21■□□□□ 0.95
KCNQ3O43525 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
KCNQ3O43525 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
KCNQ3O43525 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
KCNQ3O43525 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KCNQ3O43525 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC21■□□□□ 0.95
KCNQ3O43525 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
KCNQ3O43525 AC007541.1-201ENST00000570282 1469 ntBASIC21■□□□□ 0.95
KCNQ3O43525 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC21■□□□□ 0.95
KCNQ3O43525 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
KCNQ3O43525 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KCNQ3O43525 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KCNQ3O43525 RAD18-204ENST00000418463 563 ntTSL 4 BASIC20.99■□□□□ 0.95
KCNQ3O43525 RAD18-205ENST00000421052 582 ntTSL 3 BASIC20.99■□□□□ 0.95
KCNQ3O43525 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.99■□□□□ 0.95
KCNQ3O43525 RN7SL692P-201ENST00000464677 288 ntBASIC20.99■□□□□ 0.95
KCNQ3O43525 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.99■□□□□ 0.95
KCNQ3O43525 ZNF890P-202ENST00000530367 1156 ntBASIC20.99■□□□□ 0.95
KCNQ3O43525 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC20.99■□□□□ 0.95
KCNQ3O43525 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC20.99■□□□□ 0.95
KCNQ3O43525 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC20.99■□□□□ 0.95
KCNQ3O43525 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
KCNQ3O43525 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KCNQ3O43525 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC20.99■□□□□ 0.95
KCNQ3O43525 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KCNQ3O43525 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KCNQ3O43525 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
KCNQ3O43525 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KCNQ3O43525 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
KCNQ3O43525 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
KCNQ3O43525 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC20.99■□□□□ 0.95
KCNQ3O43525 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
KCNQ3O43525 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KCNQ3O43525 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KCNQ3O43525 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC20.98■□□□□ 0.95
KCNQ3O43525 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC20.98■□□□□ 0.95
KCNQ3O43525 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KCNQ3O43525 AC011676.5-201ENST00000624864 2660 ntBASIC20.98■□□□□ 0.95
KCNQ3O43525 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC20.98■□□□□ 0.95
KCNQ3O43525 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KCNQ3O43525 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
KCNQ3O43525 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KCNQ3O43525 EDF1-203ENST00000371649 790 ntTSL 2 BASIC20.98■□□□□ 0.95
KCNQ3O43525 COX5BP8-201ENST00000416911 349 ntBASIC20.98■□□□□ 0.95
KCNQ3O43525 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC20.98■□□□□ 0.95
KCNQ3O43525 NME2P1-201ENST00000426182 414 ntBASIC20.98■□□□□ 0.95
KCNQ3O43525 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC20.98■□□□□ 0.95
KCNQ3O43525 RN7SL618P-201ENST00000477850 296 ntBASIC20.98■□□□□ 0.95
KCNQ3O43525 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC20.98■□□□□ 0.95
KCNQ3O43525 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KCNQ3O43525 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC20.98■□□□□ 0.95
KCNQ3O43525 CHCHD2P3-201ENST00000603038 451 ntBASIC20.98■□□□□ 0.95
KCNQ3O43525 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KCNQ3O43525 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
KCNQ3O43525 AL033527.5-202ENST00000641632 1098 ntBASIC20.98■□□□□ 0.95
KCNQ3O43525 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.98■□□□□ 0.95
KCNQ3O43525 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
KCNQ3O43525 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC20.98■□□□□ 0.95
KCNQ3O43525 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KCNQ3O43525 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KCNQ3O43525 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KCNQ3O43525 LINC01144-201ENST00000626198 1710 ntBASIC20.98■□□□□ 0.95
KCNQ3O43525 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KCNQ3O43525 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
KCNQ3O43525 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
KCNQ3O43525 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KCNQ3O43525 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KCNQ3O43525 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KCNQ3O43525 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KCNQ3O43525 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
KCNQ3O43525 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KCNQ3O43525 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC20.97■□□□□ 0.95
KCNQ3O43525 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms