Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
HOXA2O43364 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.54■□□□□ 0.4
HOXA2O43364 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA2O43364 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA2O43364 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.54■□□□□ 0.4
HOXA2O43364 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA2O43364 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA2O43364 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.54■□□□□ 0.4
HOXA2O43364 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.54■□□□□ 0.4
HOXA2O43364 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA2O43364 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.54■□□□□ 0.4
HOXA2O43364 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.54■□□□□ 0.4
HOXA2O43364 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA2O43364 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA2O43364 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA2O43364 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.54■□□□□ 0.4
HOXA2O43364 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.54■□□□□ 0.4
HOXA2O43364 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.54■□□□□ 0.4
HOXA2O43364 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA2O43364 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HOXA2O43364 LINC01144-201ENST00000626198 1710 ntBASIC17.54■□□□□ 0.4
HOXA2O43364 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA2O43364 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA2O43364 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.54■□□□□ 0.4
HOXA2O43364 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.54■□□□□ 0.4
HOXA2O43364 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA2O43364 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA2O43364 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.53■□□□□ 0.4
HOXA2O43364 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.53■□□□□ 0.4
HOXA2O43364 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HOXA2O43364 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
HOXA2O43364 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.53■□□□□ 0.4
HOXA2O43364 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.53■□□□□ 0.4
HOXA2O43364 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.53■□□□□ 0.4
HOXA2O43364 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HOXA2O43364 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HOXA2O43364 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA2O43364 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.53■□□□□ 0.4
HOXA2O43364 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.53■□□□□ 0.4
HOXA2O43364 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HOXA2O43364 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA2O43364 U82695.1-201ENST00000635752 1889 ntBASIC17.53■□□□□ 0.4
HOXA2O43364 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.53■□□□□ 0.4
HOXA2O43364 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.53■□□□□ 0.4
HOXA2O43364 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA2O43364 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
HOXA2O43364 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.53■□□□□ 0.4
HOXA2O43364 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA2O43364 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
HOXA2O43364 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.53■□□□□ 0.4
HOXA2O43364 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.53■□□□□ 0.4
HOXA2O43364 SRD5A3P1-201ENST00000603021 949 ntBASIC17.53■□□□□ 0.4
HOXA2O43364 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA2O43364 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA2O43364 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA2O43364 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA2O43364 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA2O43364 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA2O43364 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA2O43364 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA2O43364 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA2O43364 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
HOXA2O43364 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA2O43364 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA2O43364 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA2O43364 SLC7A15P-201ENST00000424028 1363 ntBASIC17.53■□□□□ 0.4
HOXA2O43364 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.53■□□□□ 0.4
HOXA2O43364 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.53■□□□□ 0.4
HOXA2O43364 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXA2O43364 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
HOXA2O43364 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXA2O43364 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.52■□□□□ 0.4
HOXA2O43364 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
HOXA2O43364 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.52■□□□□ 0.4
HOXA2O43364 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.52■□□□□ 0.4
HOXA2O43364 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXA2O43364 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXA2O43364 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.52■□□□□ 0.4
HOXA2O43364 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
HOXA2O43364 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXA2O43364 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXA2O43364 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXA2O43364 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HOXA2O43364 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXA2O43364 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXA2O43364 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HOXA2O43364 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HOXA2O43364 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXA2O43364 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
HOXA2O43364 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
HOXA2O43364 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.52■□□□□ 0.4
HOXA2O43364 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.52■□□□□ 0.4
HOXA2O43364 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.52■□□□□ 0.4
HOXA2O43364 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.52■□□□□ 0.4
HOXA2O43364 GPR53P-205ENST00000457298 1084 ntBASIC17.52■□□□□ 0.4
HOXA2O43364 RN7SL752P-201ENST00000463779 287 ntBASIC17.52■□□□□ 0.4
HOXA2O43364 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.52■□□□□ 0.4
HOXA2O43364 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.52■□□□□ 0.4
HOXA2O43364 AL008721.1-201ENST00000609964 604 ntBASIC17.52■□□□□ 0.4
HOXA2O43364 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms