Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN9O14815 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.49■□□□□ 0.39
CAPN9O14815 U1.21-201ENST00000580816 167 ntBASIC17.49■□□□□ 0.39
CAPN9O14815 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.49■□□□□ 0.39
CAPN9O14815 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN9O14815 AL355385.1-201ENST00000606123 409 ntBASIC17.49■□□□□ 0.39
CAPN9O14815 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.49■□□□□ 0.39
CAPN9O14815 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN9O14815 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN9O14815 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.49■□□□□ 0.39
CAPN9O14815 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
CAPN9O14815 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN9O14815 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.49■□□□□ 0.39
CAPN9O14815 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN9O14815 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.49■□□□□ 0.39
CAPN9O14815 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CAPN9O14815 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN9O14815 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.49■□□□□ 0.39
CAPN9O14815 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN9O14815 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN9O14815 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN9O14815 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN9O14815 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN9O14815 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.48■□□□□ 0.39
CAPN9O14815 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.48■□□□□ 0.39
CAPN9O14815 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN9O14815 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.48■□□□□ 0.39
CAPN9O14815 AC092919.2-201ENST00000623631 1645 ntBASIC17.48■□□□□ 0.39
CAPN9O14815 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.48■□□□□ 0.39
CAPN9O14815 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.48■□□□□ 0.39
CAPN9O14815 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN9O14815 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN9O14815 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.48■□□□□ 0.39
CAPN9O14815 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN9O14815 YBX2P1-201ENST00000394192 760 ntBASIC17.48■□□□□ 0.39
CAPN9O14815 PMS2P4-201ENST00000412466 1052 ntBASIC17.48■□□□□ 0.39
CAPN9O14815 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.48■□□□□ 0.39
CAPN9O14815 AC112191.1-201ENST00000523689 701 ntBASIC17.48■□□□□ 0.39
CAPN9O14815 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.48■□□□□ 0.39
CAPN9O14815 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.48■□□□□ 0.39
CAPN9O14815 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.48■□□□□ 0.39
CAPN9O14815 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.48■□□□□ 0.39
CAPN9O14815 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.48■□□□□ 0.39
CAPN9O14815 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.48■□□□□ 0.39
CAPN9O14815 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN9O14815 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
CAPN9O14815 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN9O14815 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CAPN9O14815 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN9O14815 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.48■□□□□ 0.39
CAPN9O14815 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.48■□□□□ 0.39
CAPN9O14815 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CAPN9O14815 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN9O14815 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CAPN9O14815 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN9O14815 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.47■□□□□ 0.39
CAPN9O14815 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN9O14815 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CAPN9O14815 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN9O14815 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN9O14815 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN9O14815 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN9O14815 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN9O14815 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN9O14815 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.47■□□□□ 0.39
CAPN9O14815 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CAPN9O14815 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CAPN9O14815 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN9O14815 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN9O14815 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN9O14815 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN9O14815 AC002056.1-201ENST00000395613 760 ntBASIC17.47■□□□□ 0.39
CAPN9O14815 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.47■□□□□ 0.39
CAPN9O14815 HLA-J-202ENST00000469281 1241 ntBASIC17.47■□□□□ 0.39
CAPN9O14815 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN9O14815 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.47■□□□□ 0.39
CAPN9O14815 MIR3687-2-201ENST00000577708 61 ntBASIC17.47■□□□□ 0.39
CAPN9O14815 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.47■□□□□ 0.39
CAPN9O14815 MIR3687-1-201ENST00000614492 61 ntBASIC17.47■□□□□ 0.39
CAPN9O14815 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN9O14815 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN9O14815 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.47■□□□□ 0.39
CAPN9O14815 AC006538.1-201ENST00000567905 1585 ntBASIC17.47■□□□□ 0.39
CAPN9O14815 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN9O14815 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.47■□□□□ 0.39
CAPN9O14815 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN9O14815 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN9O14815 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN9O14815 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.47■□□□□ 0.39
CAPN9O14815 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN9O14815 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CAPN9O14815 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.47■□□□□ 0.39
CAPN9O14815 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.47■□□□□ 0.39
CAPN9O14815 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN9O14815 FLJ38576-201ENST00000623820 2459 ntBASIC17.46■□□□□ 0.39
CAPN9O14815 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN9O14815 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN9O14815 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN9O14815 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.46■□□□□ 0.39
CAPN9O14815 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms