Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.23■□□□□ 0.19
CDC7O00311 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDC7O00311 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.23■□□□□ 0.19
CDC7O00311 AL645728.2-201ENST00000641974 660 ntBASIC16.23■□□□□ 0.19
CDC7O00311 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.23■□□□□ 0.19
CDC7O00311 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDC7O00311 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.23■□□□□ 0.19
CDC7O00311 AC132872.4-202ENST00000622924 2756 ntBASIC16.23■□□□□ 0.19
CDC7O00311 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.23■□□□□ 0.19
CDC7O00311 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC7O00311 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
CDC7O00311 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.23■□□□□ 0.19
CDC7O00311 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.23■□□□□ 0.19
CDC7O00311 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC7O00311 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
CDC7O00311 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC7O00311 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
CDC7O00311 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC7O00311 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC7O00311 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC7O00311 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC7O00311 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC7O00311 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.22■□□□□ 0.19
CDC7O00311 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.22■□□□□ 0.19
CDC7O00311 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.22■□□□□ 0.19
CDC7O00311 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC7O00311 AC007950.2-201ENST00000615045 2347 ntBASIC16.22■□□□□ 0.19
CDC7O00311 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.22■□□□□ 0.19
CDC7O00311 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.22■□□□□ 0.19
CDC7O00311 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC7O00311 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.22■□□□□ 0.19
CDC7O00311 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC7O00311 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC7O00311 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.22■□□□□ 0.19
CDC7O00311 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC7O00311 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC7O00311 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CDC7O00311 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC7O00311 AC096734.2-201ENST00000562054 433 ntBASIC16.22■□□□□ 0.19
CDC7O00311 AL121894.2-201ENST00000602977 491 ntBASIC16.22■□□□□ 0.19
CDC7O00311 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.22■□□□□ 0.19
CDC7O00311 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC7O00311 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.22■□□□□ 0.19
CDC7O00311 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC7O00311 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC7O00311 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC7O00311 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC7O00311 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
CDC7O00311 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CDC7O00311 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC7O00311 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC7O00311 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC7O00311 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
CDC7O00311 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC7O00311 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.22■□□□□ 0.19
CDC7O00311 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC7O00311 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.22■□□□□ 0.19
CDC7O00311 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDC7O00311 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC7O00311 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC7O00311 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC7O00311 AC104109.2-201ENST00000602919 1418 ntBASIC16.21■□□□□ 0.19
CDC7O00311 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.21■□□□□ 0.19
CDC7O00311 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CDC7O00311 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC7O00311 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDC7O00311 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CDC7O00311 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.21■□□□□ 0.19
CDC7O00311 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC7O00311 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC7O00311 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC7O00311 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.21■□□□□ 0.19
CDC7O00311 RHOQP3-201ENST00000437982 621 ntBASIC16.21■□□□□ 0.19
CDC7O00311 AC079776.4-201ENST00000511039 504 ntBASIC16.21■□□□□ 0.19
CDC7O00311 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.21■□□□□ 0.19
CDC7O00311 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.21■□□□□ 0.19
CDC7O00311 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.21■□□□□ 0.19
CDC7O00311 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDC7O00311 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.21■□□□□ 0.19
CDC7O00311 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.21■□□□□ 0.19
CDC7O00311 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CDC7O00311 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.21■□□□□ 0.19
CDC7O00311 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDC7O00311 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC7O00311 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC7O00311 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.21■□□□□ 0.19
CDC7O00311 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.21■□□□□ 0.19
CDC7O00311 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC7O00311 AC024909.3-201ENST00000611513 2257 ntBASIC16.21■□□□□ 0.19
CDC7O00311 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC7O00311 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.21■□□□□ 0.19
CDC7O00311 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.21■□□□□ 0.19
CDC7O00311 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC7O00311 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CDC7O00311 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CDC7O00311 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CDC7O00311 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CDC7O00311 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CDC7O00311 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC7O00311 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms