Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.41□□□□□ -0.1
MBD3L3A6NE82 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
MBD3L3A6NE82 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MBD3L3A6NE82 LETM1P2-201ENST00000597330 2178 ntBASIC14.41□□□□□ -0.1
MBD3L3A6NE82 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.41□□□□□ -0.1
MBD3L3A6NE82 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
MBD3L3A6NE82 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
MBD3L3A6NE82 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MBD3L3A6NE82 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MBD3L3A6NE82 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
MBD3L3A6NE82 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
MBD3L3A6NE82 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.41□□□□□ -0.1
MBD3L3A6NE82 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.41□□□□□ -0.1
MBD3L3A6NE82 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MBD3L3A6NE82 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MBD3L3A6NE82 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MBD3L3A6NE82 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
MBD3L3A6NE82 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MBD3L3A6NE82 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MBD3L3A6NE82 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 RNF216P1-203ENST00000404404 2427 ntBASIC14.4□□□□□ -0.1
MBD3L3A6NE82 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.4□□□□□ -0.1
MBD3L3A6NE82 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 AL512361.1-201ENST00000554200 418 ntBASIC14.4□□□□□ -0.1
MBD3L3A6NE82 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 SPDYE22P-201ENST00000582158 798 ntBASIC14.4□□□□□ -0.1
MBD3L3A6NE82 AC004840.1-201ENST00000636359 365 ntBASIC14.4□□□□□ -0.1
MBD3L3A6NE82 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.4□□□□□ -0.1
MBD3L3A6NE82 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.4□□□□□ -0.1
MBD3L3A6NE82 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 AC005225.4-201ENST00000557330 545 ntBASIC14.39□□□□□ -0.11
MBD3L3A6NE82 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 AC012645.4-201ENST00000610691 1061 ntBASIC14.39□□□□□ -0.11
MBD3L3A6NE82 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 AL358472.5-202ENST00000641448 1267 ntBASIC14.39□□□□□ -0.11
MBD3L3A6NE82 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 FZD10-202ENST00000539839 3282 ntBASIC14.39□□□□□ -0.11
MBD3L3A6NE82 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
MBD3L3A6NE82 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms