Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 AC009947.1-201ENST00000444350 727 ntBASIC16.8■□□□□ 0.28
CCDC78A2IDD5 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 HLA-J-202ENST00000469281 1241 ntBASIC16.8■□□□□ 0.28
CCDC78A2IDD5 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 ACTL9-202ENST00000612068 1252 ntBASIC16.8■□□□□ 0.28
CCDC78A2IDD5 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
CCDC78A2IDD5 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 GGT4P-201ENST00000623672 1708 ntBASIC16.79■□□□□ 0.28
CCDC78A2IDD5 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.79■□□□□ 0.28
CCDC78A2IDD5 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 AC087641.1-201ENST00000557561 1021 ntBASIC16.79■□□□□ 0.28
CCDC78A2IDD5 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.79■□□□□ 0.28
CCDC78A2IDD5 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 AC010654.1-201ENST00000615722 808 ntBASIC16.79■□□□□ 0.28
CCDC78A2IDD5 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.79■□□□□ 0.28
CCDC78A2IDD5 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 CICP6-201ENST00000457191 2729 ntBASIC16.79■□□□□ 0.28
CCDC78A2IDD5 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 PAUPAR-201ENST00000630360 2965 ntBASIC16.79■□□□□ 0.28
CCDC78A2IDD5 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 KRT8P39-201ENST00000396270 1433 ntBASIC16.79■□□□□ 0.28
CCDC78A2IDD5 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC78A2IDD5 ME2P1-201ENST00000426028 1970 ntBASIC16.78■□□□□ 0.28
CCDC78A2IDD5 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC78A2IDD5 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC78A2IDD5 GGT3P-204ENST00000453783 1664 ntBASIC16.78■□□□□ 0.28
CCDC78A2IDD5 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC78A2IDD5 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC78A2IDD5 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC78A2IDD5 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC78A2IDD5 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CCDC78A2IDD5 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC78A2IDD5 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC78A2IDD5 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC78A2IDD5 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC78A2IDD5 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC78A2IDD5 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC78A2IDD5 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC78A2IDD5 IGHV3-22-201ENST00000520721 359 ntBASIC16.78■□□□□ 0.28
CCDC78A2IDD5 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC78A2IDD5 AC005412.3-201ENST00000580309 715 ntBASIC16.78■□□□□ 0.28
CCDC78A2IDD5 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC78A2IDD5 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms