Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.88■□□□□ 0.61
CLIC4Q9Y696 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.88■□□□□ 0.61
CLIC4Q9Y696 AC005622.1-201ENST00000636801 1703 ntBASIC18.88■□□□□ 0.61
CLIC4Q9Y696 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLIC4Q9Y696 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 HLA-A-201ENST00000376802 1334 ntBASIC18.87■□□□□ 0.61
CLIC4Q9Y696 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 AP001005.1-201ENST00000571755 1248 ntBASIC18.87■□□□□ 0.61
CLIC4Q9Y696 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 AL031055.1-201ENST00000606362 631 ntBASIC18.87■□□□□ 0.61
CLIC4Q9Y696 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.87■□□□□ 0.61
CLIC4Q9Y696 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 AC010507.1-201ENST00000633895 436 ntBASIC18.86■□□□□ 0.61
CLIC4Q9Y696 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 CROCCP1-201ENST00000426910 5675 ntBASIC18.86■□□□□ 0.61
CLIC4Q9Y696 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CLIC4Q9Y696 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 CRYGEP-201ENST00000412192 528 ntBASIC18.85■□□□□ 0.61
CLIC4Q9Y696 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.85■□□□□ 0.61
CLIC4Q9Y696 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 AL031432.2-201ENST00000566714 459 ntBASIC18.85■□□□□ 0.61
CLIC4Q9Y696 AL928711.1-201ENST00000570165 459 ntBASIC18.85■□□□□ 0.61
CLIC4Q9Y696 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms