Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.14■□□□□ 0.18
PCDHGA3Q9Y5H0 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PCDHGA3Q9Y5H0 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PCDHGA3Q9Y5H0 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 AC005237.2-201ENST00000434368 219 ntBASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 KRT8P48-201ENST00000515599 1220 ntBASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 AL512356.2-201ENST00000546955 174 ntBASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 AL161645.1-201ENST00000622716 1255 ntBASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 AL662844.4-201ENST00000606367 2838 ntBASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGA3Q9Y5H0 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 TFAMP1-201ENST00000412727 736 ntBASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 AL592309.1-201ENST00000443127 649 ntBASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 AC069335.1-201ENST00000489972 472 ntBASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 AC079140.1-201ENST00000508039 487 ntBASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 RARRES2P8-201ENST00000566335 367 ntBASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA3Q9Y5H0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGA3Q9Y5H0 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGA3Q9Y5H0 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.12■□□□□ 0.17
PCDHGA3Q9Y5H0 LINC00304-203ENST00000565008 1864 ntBASIC16.12■□□□□ 0.17
PCDHGA3Q9Y5H0 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGA3Q9Y5H0 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGA3Q9Y5H0 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms