Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
YIPF1Q9Y548 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 RN7SL618P-201ENST00000477850 296 ntBASIC17.15■□□□□ 0.34
YIPF1Q9Y548 AP005018.1-201ENST00000525475 301 ntBASIC17.15■□□□□ 0.34
YIPF1Q9Y548 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 SPDYE22P-201ENST00000582158 798 ntBASIC17.15■□□□□ 0.34
YIPF1Q9Y548 AC026979.3-201ENST00000607315 403 ntBASIC17.15■□□□□ 0.34
YIPF1Q9Y548 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 AC004840.1-201ENST00000636359 365 ntBASIC17.15■□□□□ 0.34
YIPF1Q9Y548 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 GGT3P-204ENST00000453783 1664 ntBASIC17.15■□□□□ 0.34
YIPF1Q9Y548 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 AC005332.8-201ENST00000622750 2735 ntBASIC17.15■□□□□ 0.34
YIPF1Q9Y548 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
YIPF1Q9Y548 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
YIPF1Q9Y548 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
YIPF1Q9Y548 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
YIPF1Q9Y548 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
YIPF1Q9Y548 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
YIPF1Q9Y548 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
YIPF1Q9Y548 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
YIPF1Q9Y548 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.14■□□□□ 0.33
YIPF1Q9Y548 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
YIPF1Q9Y548 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
YIPF1Q9Y548 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.14■□□□□ 0.33
YIPF1Q9Y548 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
YIPF1Q9Y548 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
YIPF1Q9Y548 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
YIPF1Q9Y548 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
YIPF1Q9Y548 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
YIPF1Q9Y548 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.14■□□□□ 0.33
YIPF1Q9Y548 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.14■□□□□ 0.33
YIPF1Q9Y548 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
YIPF1Q9Y548 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.14■□□□□ 0.33
YIPF1Q9Y548 AL512361.1-201ENST00000554200 418 ntBASIC17.14■□□□□ 0.33
YIPF1Q9Y548 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
YIPF1Q9Y548 AL662799.1-202ENST00000614205 422 ntBASIC17.14■□□□□ 0.33
YIPF1Q9Y548 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
YIPF1Q9Y548 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
YIPF1Q9Y548 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
YIPF1Q9Y548 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
YIPF1Q9Y548 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms