Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH9Q9ULB4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH9Q9ULB4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CDH9Q9ULB4 FLJ38576-201ENST00000623820 2459 ntBASIC17.42■□□□□ 0.38
CDH9Q9ULB4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH9Q9ULB4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH9Q9ULB4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.42■□□□□ 0.38
CDH9Q9ULB4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH9Q9ULB4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH9Q9ULB4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH9Q9ULB4 OR6D1P-203ENST00000641209 4860 ntBASIC17.42■□□□□ 0.38
CDH9Q9ULB4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.42■□□□□ 0.38
CDH9Q9ULB4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 AGGF1P2-201ENST00000426656 2106 ntBASIC17.41■□□□□ 0.38
CDH9Q9ULB4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 KLF2P3-201ENST00000451977 1087 ntBASIC17.41■□□□□ 0.38
CDH9Q9ULB4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 AC093512.1-201ENST00000617969 520 ntBASIC17.41■□□□□ 0.38
CDH9Q9ULB4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 AC005622.1-201ENST00000636801 1703 ntBASIC17.41■□□□□ 0.38
CDH9Q9ULB4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH9Q9ULB4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 POU5F1P6-201ENST00000466990 990 ntBASIC17.4■□□□□ 0.38
CDH9Q9ULB4 RNA5SP410-201ENST00000516285 106 ntBASIC17.4■□□□□ 0.38
CDH9Q9ULB4 MIR4453-201ENST00000584019 89 ntBASIC17.4■□□□□ 0.38
CDH9Q9ULB4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH9Q9ULB4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.39■□□□□ 0.38
CDH9Q9ULB4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.38
CDH9Q9ULB4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH9Q9ULB4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms