Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 SPTSSB-204ENST00000617024 1292 ntBASIC16.02■□□□□ 0.16
CPNE7Q9UBL6 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.16
CPNE7Q9UBL6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.02■□□□□ 0.16
CPNE7Q9UBL6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE7Q9UBL6 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE7Q9UBL6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE7Q9UBL6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
CPNE7Q9UBL6 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE7Q9UBL6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.02■□□□□ 0.15
CPNE7Q9UBL6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
CPNE7Q9UBL6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE7Q9UBL6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE7Q9UBL6 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE7Q9UBL6 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE7Q9UBL6 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.02■□□□□ 0.15
CPNE7Q9UBL6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 HLA-H-201ENST00000383620 1096 ntBASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 MIR4453-201ENST00000584019 89 ntBASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 AC005498.2-205ENST00000593218 784 ntBASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 AC011467.4-201ENST00000594891 528 ntBASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE7Q9UBL6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE7Q9UBL6 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16■□□□□ 0.15
CPNE7Q9UBL6 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CPNE7Q9UBL6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE7Q9UBL6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE7Q9UBL6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16■□□□□ 0.15
CPNE7Q9UBL6 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE7Q9UBL6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16■□□□□ 0.15
CPNE7Q9UBL6 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE7Q9UBL6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16■□□□□ 0.15
CPNE7Q9UBL6 GGT4P-201ENST00000623672 1708 ntBASIC16■□□□□ 0.15
CPNE7Q9UBL6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CPNE7Q9UBL6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE7Q9UBL6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE7Q9UBL6 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE7Q9UBL6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE7Q9UBL6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CPNE7Q9UBL6 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE7Q9UBL6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CPNE7Q9UBL6 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16■□□□□ 0.15
CPNE7Q9UBL6 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16■□□□□ 0.15
CPNE7Q9UBL6 BAD-202ENST00000394531 631 ntTSL 3 BASIC16■□□□□ 0.15
CPNE7Q9UBL6 WRB-204ENST00000398753 699 ntTSL 3 BASIC16■□□□□ 0.15
CPNE7Q9UBL6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE7Q9UBL6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16■□□□□ 0.15
CPNE7Q9UBL6 AC098859.1-201ENST00000502915 1238 ntBASIC16■□□□□ 0.15
CPNE7Q9UBL6 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16■□□□□ 0.15
CPNE7Q9UBL6 BAD-207ENST00000544785 525 ntTSL 3 BASIC16■□□□□ 0.15
CPNE7Q9UBL6 DUT-210ENST00000559935 569 ntTSL 3 BASIC16■□□□□ 0.15
CPNE7Q9UBL6 AC140878.1-201ENST00000565277 250 ntBASIC16■□□□□ 0.15
CPNE7Q9UBL6 AC018529.1-201ENST00000613063 361 ntBASIC16■□□□□ 0.15
CPNE7Q9UBL6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16■□□□□ 0.15
CPNE7Q9UBL6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE7Q9UBL6 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE7Q9UBL6 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE7Q9UBL6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE7Q9UBL6 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16■□□□□ 0.15
CPNE7Q9UBL6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16■□□□□ 0.15
CPNE7Q9UBL6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE7Q9UBL6 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16■□□□□ 0.15
CPNE7Q9UBL6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE7Q9UBL6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16■□□□□ 0.15
CPNE7Q9UBL6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16■□□□□ 0.15
CPNE7Q9UBL6 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms