Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.79■□□□□ 0.76
SALL1Q9NSC2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SALL1Q9NSC2 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SALL1Q9NSC2 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SALL1Q9NSC2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.79■□□□□ 0.76
SALL1Q9NSC2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.79■□□□□ 0.76
SALL1Q9NSC2 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
SALL1Q9NSC2 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
SALL1Q9NSC2 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SALL1Q9NSC2 AC087499.5-201ENST00000452760 1342 ntBASIC19.79■□□□□ 0.76
SALL1Q9NSC2 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SALL1Q9NSC2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SALL1Q9NSC2 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SALL1Q9NSC2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.79■□□□□ 0.76
SALL1Q9NSC2 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SALL1Q9NSC2 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SALL1Q9NSC2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SALL1Q9NSC2 RPL37AP1-201ENST00000412502 279 ntBASIC19.78■□□□□ 0.76
SALL1Q9NSC2 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.78■□□□□ 0.76
SALL1Q9NSC2 AL080243.2-201ENST00000418783 582 ntBASIC19.78■□□□□ 0.76
SALL1Q9NSC2 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.78■□□□□ 0.76
SALL1Q9NSC2 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
SALL1Q9NSC2 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.78■□□□□ 0.76
SALL1Q9NSC2 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SALL1Q9NSC2 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.78■□□□□ 0.76
SALL1Q9NSC2 AL844908.2-201ENST00000609461 460 ntBASIC19.78■□□□□ 0.76
SALL1Q9NSC2 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SALL1Q9NSC2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SALL1Q9NSC2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SALL1Q9NSC2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
SALL1Q9NSC2 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SALL1Q9NSC2 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.78■□□□□ 0.76
SALL1Q9NSC2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SALL1Q9NSC2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SALL1Q9NSC2 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.78■□□□□ 0.76
SALL1Q9NSC2 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SALL1Q9NSC2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.78■□□□□ 0.76
SALL1Q9NSC2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SALL1Q9NSC2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SALL1Q9NSC2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SALL1Q9NSC2 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.78■□□□□ 0.76
SALL1Q9NSC2 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.78■□□□□ 0.76
SALL1Q9NSC2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SALL1Q9NSC2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SALL1Q9NSC2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.78■□□□□ 0.76
SALL1Q9NSC2 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SALL1Q9NSC2 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SALL1Q9NSC2 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SALL1Q9NSC2 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.77■□□□□ 0.76
SALL1Q9NSC2 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.77■□□□□ 0.76
SALL1Q9NSC2 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.77■□□□□ 0.76
SALL1Q9NSC2 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.77■□□□□ 0.76
SALL1Q9NSC2 AC190387.1-201ENST00000551683 408 ntBASIC19.77■□□□□ 0.76
SALL1Q9NSC2 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.77■□□□□ 0.76
SALL1Q9NSC2 AL589739.1-201ENST00000607720 493 ntBASIC19.77■□□□□ 0.76
SALL1Q9NSC2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SALL1Q9NSC2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SALL1Q9NSC2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SALL1Q9NSC2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SALL1Q9NSC2 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SALL1Q9NSC2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SALL1Q9NSC2 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SALL1Q9NSC2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
SALL1Q9NSC2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.77■□□□□ 0.76
SALL1Q9NSC2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.77■□□□□ 0.76
SALL1Q9NSC2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SALL1Q9NSC2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
SALL1Q9NSC2 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SALL1Q9NSC2 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
SALL1Q9NSC2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SALL1Q9NSC2 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SALL1Q9NSC2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
SALL1Q9NSC2 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SALL1Q9NSC2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SALL1Q9NSC2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SALL1Q9NSC2 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SALL1Q9NSC2 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SALL1Q9NSC2 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.76■□□□□ 0.75
SALL1Q9NSC2 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SALL1Q9NSC2 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.76■□□□□ 0.75
SALL1Q9NSC2 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SALL1Q9NSC2 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.76■□□□□ 0.75
SALL1Q9NSC2 AL079307.3-201ENST00000556114 283 ntBASIC19.76■□□□□ 0.75
SALL1Q9NSC2 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SALL1Q9NSC2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SALL1Q9NSC2 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SALL1Q9NSC2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SALL1Q9NSC2 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
SALL1Q9NSC2 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SALL1Q9NSC2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.76■□□□□ 0.75
SALL1Q9NSC2 GGT3P-204ENST00000453783 1664 ntBASIC19.76■□□□□ 0.75
SALL1Q9NSC2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SALL1Q9NSC2 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SALL1Q9NSC2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SALL1Q9NSC2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SALL1Q9NSC2 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SALL1Q9NSC2 PCDHB19P-201ENST00000570871 2371 ntBASIC19.76■□□□□ 0.75
SALL1Q9NSC2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SALL1Q9NSC2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SALL1Q9NSC2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms