Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 KRT18P34-201ENST00000488218 1270 ntBASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 AC092658.1-201ENST00000505836 891 ntBASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 CHCHD2P3-201ENST00000603038 451 ntBASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 AC008494.3-201ENST00000606615 944 ntBASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 AC004790.1-201ENST00000612686 536 ntBASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 GPAA1P2-202ENST00000606848 1787 ntBASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PDLIM7Q9NR12 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 RN7SL828P-201ENST00000607615 303 ntBASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM7Q9NR12 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDLIM7Q9NR12 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDLIM7Q9NR12 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.33■□□□□ 0.53
PDLIM7Q9NR12 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PDLIM7Q9NR12 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDLIM7Q9NR12 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
PDLIM7Q9NR12 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDLIM7Q9NR12 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDLIM7Q9NR12 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.53
PDLIM7Q9NR12 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
PDLIM7Q9NR12 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PDLIM7Q9NR12 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PDLIM7Q9NR12 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDLIM7Q9NR12 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDLIM7Q9NR12 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PDLIM7Q9NR12 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.33■□□□□ 0.52
PDLIM7Q9NR12 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDLIM7Q9NR12 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PDLIM7Q9NR12 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.33■□□□□ 0.52
PDLIM7Q9NR12 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.33■□□□□ 0.52
PDLIM7Q9NR12 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.33■□□□□ 0.52
PDLIM7Q9NR12 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.33■□□□□ 0.52
PDLIM7Q9NR12 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.33■□□□□ 0.52
PDLIM7Q9NR12 BANF1P1-201ENST00000553684 263 ntBASIC18.33■□□□□ 0.52
PDLIM7Q9NR12 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.33■□□□□ 0.52
PDLIM7Q9NR12 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.33■□□□□ 0.52
PDLIM7Q9NR12 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.33■□□□□ 0.52
PDLIM7Q9NR12 FLJ38576-201ENST00000623820 2459 ntBASIC18.33■□□□□ 0.52
PDLIM7Q9NR12 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.33■□□□□ 0.52
PDLIM7Q9NR12 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDLIM7Q9NR12 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PDLIM7Q9NR12 BTBD7P1-201ENST00000447253 1453 ntBASIC18.33■□□□□ 0.52
PDLIM7Q9NR12 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDLIM7Q9NR12 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms