Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP29Q9HBJ7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
USP29Q9HBJ7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
USP29Q9HBJ7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
USP29Q9HBJ7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.05■□□□□ 0.32
USP29Q9HBJ7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USP29Q9HBJ7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP29Q9HBJ7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP29Q9HBJ7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP29Q9HBJ7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
USP29Q9HBJ7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USP29Q9HBJ7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.05■□□□□ 0.32
USP29Q9HBJ7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP29Q9HBJ7 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP29Q9HBJ7 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
USP29Q9HBJ7 LINC00554-201ENST00000564841 3011 ntBASIC17.05■□□□□ 0.32
USP29Q9HBJ7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 AC023274.1-201ENST00000418278 595 ntBASIC17.04■□□□□ 0.32
USP29Q9HBJ7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 AC012569.1-201ENST00000591191 1524 ntBASIC17.04■□□□□ 0.32
USP29Q9HBJ7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.04■□□□□ 0.32
USP29Q9HBJ7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP29Q9HBJ7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP29Q9HBJ7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.03■□□□□ 0.32
USP29Q9HBJ7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
USP29Q9HBJ7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP29Q9HBJ7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP29Q9HBJ7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
USP29Q9HBJ7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
USP29Q9HBJ7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP29Q9HBJ7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.03■□□□□ 0.32
USP29Q9HBJ7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP29Q9HBJ7 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
USP29Q9HBJ7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
USP29Q9HBJ7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.03■□□□□ 0.32
USP29Q9HBJ7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP29Q9HBJ7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
USP29Q9HBJ7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.03■□□□□ 0.32
USP29Q9HBJ7 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.03■□□□□ 0.32
USP29Q9HBJ7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.03■□□□□ 0.32
USP29Q9HBJ7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.03■□□□□ 0.32
USP29Q9HBJ7 AC005829.1-201ENST00000570002 483 ntBASIC17.03■□□□□ 0.32
USP29Q9HBJ7 MIR4515-201ENST00000584082 81 ntBASIC17.03■□□□□ 0.32
USP29Q9HBJ7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.03■□□□□ 0.32
USP29Q9HBJ7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.03■□□□□ 0.32
USP29Q9HBJ7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP29Q9HBJ7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.03■□□□□ 0.32
USP29Q9HBJ7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP29Q9HBJ7 AC022188.1-201ENST00000620960 1664 ntBASIC17.03■□□□□ 0.32
USP29Q9HBJ7 AL365203.3-201ENST00000609742 2057 ntBASIC17.03■□□□□ 0.32
USP29Q9HBJ7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
USP29Q9HBJ7 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP29Q9HBJ7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.03■□□□□ 0.32
USP29Q9HBJ7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms