Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 TOP3BP1-201ENST00000420768 1380 ntBASIC20.38■□□□□ 0.85
UPF2Q9HAU5 DBET-201ENST00000630918 3363 ntBASIC20.38■□□□□ 0.85
UPF2Q9HAU5 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UPF2Q9HAU5 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.38■□□□□ 0.85
UPF2Q9HAU5 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC20.38■□□□□ 0.85
UPF2Q9HAU5 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC20.38■□□□□ 0.85
UPF2Q9HAU5 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UPF2Q9HAU5 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UPF2Q9HAU5 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
UPF2Q9HAU5 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
UPF2Q9HAU5 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.38■□□□□ 0.85
UPF2Q9HAU5 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UPF2Q9HAU5 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC20.38■□□□□ 0.85
UPF2Q9HAU5 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UPF2Q9HAU5 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
UPF2Q9HAU5 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UPF2Q9HAU5 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UPF2Q9HAU5 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
UPF2Q9HAU5 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
UPF2Q9HAU5 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UPF2Q9HAU5 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UPF2Q9HAU5 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
UPF2Q9HAU5 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UPF2Q9HAU5 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC20.37■□□□□ 0.85
UPF2Q9HAU5 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPF2Q9HAU5 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.37■□□□□ 0.85
UPF2Q9HAU5 AC233702.3-201ENST00000578656 1387 ntBASIC20.37■□□□□ 0.85
UPF2Q9HAU5 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPF2Q9HAU5 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPF2Q9HAU5 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UPF2Q9HAU5 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.37■□□□□ 0.85
UPF2Q9HAU5 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC20.37■□□□□ 0.85
UPF2Q9HAU5 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPF2Q9HAU5 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPF2Q9HAU5 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPF2Q9HAU5 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPF2Q9HAU5 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPF2Q9HAU5 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.37■□□□□ 0.85
UPF2Q9HAU5 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
UPF2Q9HAU5 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UPF2Q9HAU5 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
UPF2Q9HAU5 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.37■□□□□ 0.85
UPF2Q9HAU5 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.37■□□□□ 0.85
UPF2Q9HAU5 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.37■□□□□ 0.85
UPF2Q9HAU5 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
UPF2Q9HAU5 AL590326.2-201ENST00000625139 305 ntBASIC20.37■□□□□ 0.85
UPF2Q9HAU5 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.37■□□□□ 0.85
UPF2Q9HAU5 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC20.37■□□□□ 0.85
UPF2Q9HAU5 AL031731.1-201ENST00000642131 2094 ntBASIC20.37■□□□□ 0.85
UPF2Q9HAU5 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPF2Q9HAU5 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPF2Q9HAU5 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPF2Q9HAU5 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPF2Q9HAU5 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPF2Q9HAU5 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 FES-204ENST00000414248 2327 ntTSL 2 BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 AL512652.2-201ENST00000625156 1716 ntBASIC20.36■□□□□ 0.85
UPF2Q9HAU5 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UPF2Q9HAU5 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UPF2Q9HAU5 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms