Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.88■□□□□ 0.13
PIF1Q9H611 AP002414.4-201ENST00000589764 1148 ntBASIC15.88■□□□□ 0.13
PIF1Q9H611 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.88■□□□□ 0.13
PIF1Q9H611 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PIF1Q9H611 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.88■□□□□ 0.13
PIF1Q9H611 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.88■□□□□ 0.13
PIF1Q9H611 AP003680.1-201ENST00000598970 3660 ntBASIC15.88■□□□□ 0.13
PIF1Q9H611 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.88■□□□□ 0.13
PIF1Q9H611 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PIF1Q9H611 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PIF1Q9H611 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.88■□□□□ 0.13
PIF1Q9H611 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.88■□□□□ 0.13
PIF1Q9H611 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.88■□□□□ 0.13
PIF1Q9H611 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PIF1Q9H611 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.88■□□□□ 0.13
PIF1Q9H611 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
PIF1Q9H611 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PIF1Q9H611 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PIF1Q9H611 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
PIF1Q9H611 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.88■□□□□ 0.13
PIF1Q9H611 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PIF1Q9H611 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PIF1Q9H611 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PIF1Q9H611 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PIF1Q9H611 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.87■□□□□ 0.13
PIF1Q9H611 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PIF1Q9H611 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
PIF1Q9H611 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PIF1Q9H611 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PIF1Q9H611 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PIF1Q9H611 KRT17P6-201ENST00000453795 1220 ntBASIC15.87■□□□□ 0.13
PIF1Q9H611 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
PIF1Q9H611 TOB2P1-201ENST00000469761 992 ntBASIC15.87■□□□□ 0.13
PIF1Q9H611 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.87■□□□□ 0.13
PIF1Q9H611 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.87■□□□□ 0.13
PIF1Q9H611 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.87■□□□□ 0.13
PIF1Q9H611 MIR3180-1-201ENST00000580374 94 ntBASIC15.87■□□□□ 0.13
PIF1Q9H611 MIR3180-3-201ENST00000584616 94 ntBASIC15.87■□□□□ 0.13
PIF1Q9H611 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.87■□□□□ 0.13
PIF1Q9H611 AP000867.4-201ENST00000641616 219 ntBASIC15.87■□□□□ 0.13
PIF1Q9H611 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
PIF1Q9H611 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PIF1Q9H611 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PIF1Q9H611 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PIF1Q9H611 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PIF1Q9H611 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PIF1Q9H611 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.87■□□□□ 0.13
PIF1Q9H611 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PIF1Q9H611 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PIF1Q9H611 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.87■□□□□ 0.13
PIF1Q9H611 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.87■□□□□ 0.13
PIF1Q9H611 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.87■□□□□ 0.13
PIF1Q9H611 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.87■□□□□ 0.13
PIF1Q9H611 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PIF1Q9H611 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PIF1Q9H611 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PIF1Q9H611 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PIF1Q9H611 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
PIF1Q9H611 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PIF1Q9H611 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PIF1Q9H611 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PIF1Q9H611 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PIF1Q9H611 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PIF1Q9H611 AL603832.2-201ENST00000566195 2125 ntBASIC15.86■□□□□ 0.13
PIF1Q9H611 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
PIF1Q9H611 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PIF1Q9H611 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PIF1Q9H611 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PIF1Q9H611 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PIF1Q9H611 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.86■□□□□ 0.13
PIF1Q9H611 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PIF1Q9H611 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PIF1Q9H611 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PIF1Q9H611 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
PIF1Q9H611 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.86■□□□□ 0.13
PIF1Q9H611 LINC00265-3P-201ENST00000447588 903 ntBASIC15.86■□□□□ 0.13
PIF1Q9H611 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.86■□□□□ 0.13
PIF1Q9H611 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PIF1Q9H611 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PIF1Q9H611 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.86■□□□□ 0.13
PIF1Q9H611 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.86■□□□□ 0.13
PIF1Q9H611 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.86■□□□□ 0.13
PIF1Q9H611 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PIF1Q9H611 AC092329.2-201ENST00000598402 547 ntBASIC15.86■□□□□ 0.13
PIF1Q9H611 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PIF1Q9H611 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PIF1Q9H611 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PIF1Q9H611 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PIF1Q9H611 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PIF1Q9H611 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.86■□□□□ 0.13
PIF1Q9H611 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
PIF1Q9H611 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
PIF1Q9H611 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PIF1Q9H611 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.86■□□□□ 0.13
PIF1Q9H611 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PIF1Q9H611 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
PIF1Q9H611 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PIF1Q9H611 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PIF1Q9H611 GGT3P-204ENST00000453783 1664 ntBASIC15.86■□□□□ 0.13
PIF1Q9H611 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms