Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 POU5F1P6-201ENST00000466990 990 ntBASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 SART3-203ENST00000546611 1184 ntBASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 AC091304.2-201ENST00000564639 760 ntBASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 AC005412.3-201ENST00000580309 715 ntBASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 LINC01711-201ENST00000598340 967 ntBASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 PI4KAP1-204ENST00000612579 1703 ntBASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.34■□□□□ 0.05
POLR2J3Q9H1A7 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
POLR2J3Q9H1A7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.33■□□□□ 0.05
POLR2J3Q9H1A7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
POLR2J3Q9H1A7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.33■□□□□ 0.05
POLR2J3Q9H1A7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
POLR2J3Q9H1A7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.33■□□□□ 0.05
POLR2J3Q9H1A7 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 HCG4-201ENST00000418983 998 ntBASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 AL512652.2-201ENST00000625156 1716 ntBASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
POLR2J3Q9H1A7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
POLR2J3Q9H1A7 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
POLR2J3Q9H1A7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
POLR2J3Q9H1A7 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
POLR2J3Q9H1A7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
POLR2J3Q9H1A7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.32■□□□□ 0.04
POLR2J3Q9H1A7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.32■□□□□ 0.04
POLR2J3Q9H1A7 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
POLR2J3Q9H1A7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms