Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 AC138894.3-201ENST00000603787 634 ntBASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 AC092119.3-201ENST00000612618 583 ntBASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHACTR1Q9C0D0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 UPK3BP1-201ENST00000428678 509 ntBASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 FGFR3P6-201ENST00000457012 610 ntBASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 MTDHP3-201ENST00000594186 672 ntBASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 MTDHP4-201ENST00000600287 670 ntBASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 GGTLC5P-201ENST00000617623 998 ntBASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHACTR1Q9C0D0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 ELK2BP-201ENST00000415014 1224 ntBASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 LAGE3P1-201ENST00000425356 484 ntBASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 AC006557.2-201ENST00000592985 1240 ntBASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHACTR1Q9C0D0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms