Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPF3BQ9BZI7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.77■□□□□ 0.76
UPF3BQ9BZI7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.77■□□□□ 0.76
UPF3BQ9BZI7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UPF3BQ9BZI7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
UPF3BQ9BZI7 AL162727.3-201ENST00000635661 2787 ntBASIC19.77■□□□□ 0.75
UPF3BQ9BZI7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
UPF3BQ9BZI7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 AC024909.3-201ENST00000611513 2257 ntBASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 MRPL3P1-201ENST00000400109 1033 ntBASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 AC092183.1-201ENST00000469884 875 ntBASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.76■□□□□ 0.75
UPF3BQ9BZI7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 HCG4-201ENST00000418983 998 ntBASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 AL671883.3-201ENST00000603274 991 ntBASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 AC006449.6-201ENST00000612330 2296 ntBASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 AL365203.3-201ENST00000609742 2057 ntBASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 HLA-A-201ENST00000376802 1334 ntBASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.75■□□□□ 0.75
UPF3BQ9BZI7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 HYMAI-201ENST00000635591 3347 ntBASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 MIR1233-2-201ENST00000408138 82 ntBASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 MIR1233-1-201ENST00000408722 82 ntBASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 AL773604.1-201ENST00000617417 272 ntBASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 AP001350.2-201ENST00000625104 1094 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms