Protein–RNA interactions for Protein: Q9BW85

CCDC94, Coiled-coil domain-containing protein 94, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94Q9BW85 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC94Q9BW85 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC94Q9BW85 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC94Q9BW85 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CCDC94Q9BW85 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC94Q9BW85 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC94Q9BW85 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC94Q9BW85 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC94Q9BW85 AC092171.3-201ENST00000610122 2651 ntBASIC18.82■□□□□ 0.6
CCDC94Q9BW85 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC94Q9BW85 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC94Q9BW85 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC94Q9BW85 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC94Q9BW85 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC94Q9BW85 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC94Q9BW85 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC94Q9BW85 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC94Q9BW85 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC94Q9BW85 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC94Q9BW85 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC94Q9BW85 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC94Q9BW85 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC94Q9BW85 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC94Q9BW85 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC94Q9BW85 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC94Q9BW85 AC009947.1-201ENST00000444350 727 ntBASIC18.81■□□□□ 0.6
CCDC94Q9BW85 AC108751.1-201ENST00000490852 363 ntBASIC18.81■□□□□ 0.6
CCDC94Q9BW85 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC94Q9BW85 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC94Q9BW85 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC94Q9BW85 AL805961.1-202ENST00000641562 540 ntBASIC18.81■□□□□ 0.6
CCDC94Q9BW85 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC94Q9BW85 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC94Q9BW85 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC94Q9BW85 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC94Q9BW85 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC94Q9BW85 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC94Q9BW85 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC94Q9BW85 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC94Q9BW85 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC94Q9BW85 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC94Q9BW85 CICP4-201ENST00000447359 2812 ntBASIC18.81■□□□□ 0.6
CCDC94Q9BW85 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC94Q9BW85 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC94Q9BW85 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC94Q9BW85 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC94Q9BW85 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC94Q9BW85 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC94Q9BW85 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC94Q9BW85 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC94Q9BW85 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC94Q9BW85 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC94Q9BW85 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC94Q9BW85 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC94Q9BW85 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CCDC94Q9BW85 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC94Q9BW85 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CCDC94Q9BW85 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.8■□□□□ 0.6
CCDC94Q9BW85 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
CCDC94Q9BW85 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC94Q9BW85 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC94Q9BW85 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC94Q9BW85 AC027601.4-201ENST00000611259 610 ntBASIC18.8■□□□□ 0.6
CCDC94Q9BW85 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CCDC94Q9BW85 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC94Q9BW85 GOLGA8DP-202ENST00000341390 2184 ntBASIC18.8■□□□□ 0.6
CCDC94Q9BW85 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC94Q9BW85 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CCDC94Q9BW85 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC94Q9BW85 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC94Q9BW85 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC94Q9BW85 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
CCDC94Q9BW85 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC94Q9BW85 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC94Q9BW85 TNRC18P2-201ENST00000417666 2714 ntBASIC18.8■□□□□ 0.6
CCDC94Q9BW85 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 MIR940-201ENST00000401276 94 ntBASIC18.79■□□□□ 0.6
CCDC94Q9BW85 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.79■□□□□ 0.6
CCDC94Q9BW85 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms