Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 AC007950.2-201ENST00000615045 2347 ntBASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
CHRDL1Q9BU40 AC079328.2-201ENST00000561241 3354 ntBASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 AC243591.1-201ENST00000452967 1364 ntBASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 AP002414.1-201ENST00000391405 1147 ntBASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 SCARNA2-201ENST00000458748 420 ntBASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 UNC93B7-201ENST00000509439 705 ntBASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 AL589182.2-201ENST00000619332 1049 ntBASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHRDL1Q9BU40 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CHRDL1Q9BU40 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CHRDL1Q9BU40 AC092171.3-201ENST00000610122 2651 ntBASIC13.21□□□□□ -0.3
CHRDL1Q9BU40 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.3
CHRDL1Q9BU40 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CHRDL1Q9BU40 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CHRDL1Q9BU40 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
CHRDL1Q9BU40 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.2□□□□□ -0.3
CHRDL1Q9BU40 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms