Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ABCA3Q99758 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ABCA3Q99758 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
ABCA3Q99758 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC21.53■■□□□ 1.04
ABCA3Q99758 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
ABCA3Q99758 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC21.53■■□□□ 1.04
ABCA3Q99758 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC21.53■■□□□ 1.04
ABCA3Q99758 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC21.53■■□□□ 1.04
ABCA3Q99758 METTL26-214ENST00000614890 801 ntTSL 3 BASIC21.53■■□□□ 1.04
ABCA3Q99758 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.53■■□□□ 1.04
ABCA3Q99758 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ABCA3Q99758 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ABCA3Q99758 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
ABCA3Q99758 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ABCA3Q99758 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC21.52■■□□□ 1.04
ABCA3Q99758 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC21.52■■□□□ 1.04
ABCA3Q99758 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ABCA3Q99758 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ABCA3Q99758 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ABCA3Q99758 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ABCA3Q99758 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ABCA3Q99758 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
ABCA3Q99758 FXR1-221ENST00000491674 365 ntTSL 2 BASIC21.52■■□□□ 1.04
ABCA3Q99758 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
ABCA3Q99758 SLED1-202ENST00000512051 380 ntBASIC21.52■■□□□ 1.04
ABCA3Q99758 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC21.52■■□□□ 1.04
ABCA3Q99758 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC21.52■■□□□ 1.04
ABCA3Q99758 RN7SL190P-201ENST00000582519 257 ntBASIC21.52■■□□□ 1.04
ABCA3Q99758 AC106872.11-201ENST00000605838 421 ntBASIC21.52■■□□□ 1.04
ABCA3Q99758 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ABCA3Q99758 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC21.52■■□□□ 1.04
ABCA3Q99758 HADH-212ENST00000638621 741 ntTSL 5 BASIC21.52■■□□□ 1.04
ABCA3Q99758 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC21.52■■□□□ 1.04
ABCA3Q99758 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ABCA3Q99758 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ABCA3Q99758 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
ABCA3Q99758 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
ABCA3Q99758 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
ABCA3Q99758 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.52■■□□□ 1.04
ABCA3Q99758 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC21.52■■□□□ 1.04
ABCA3Q99758 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ABCA3Q99758 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC21.52■■□□□ 1.04
ABCA3Q99758 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ABCA3Q99758 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
ABCA3Q99758 C1QBPP1-201ENST00000400117 770 ntBASIC21.52■■□□□ 1.03
ABCA3Q99758 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC21.52■■□□□ 1.03
ABCA3Q99758 MTX1P1-201ENST00000440904 838 ntBASIC21.52■■□□□ 1.03
ABCA3Q99758 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC21.52■■□□□ 1.03
ABCA3Q99758 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ABCA3Q99758 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC21.52■■□□□ 1.03
ABCA3Q99758 AL008638.5-201ENST00000623814 1298 ntBASIC21.52■■□□□ 1.03
ABCA3Q99758 RETN-203ENST00000629642 400 ntTSL 5 BASIC21.52■■□□□ 1.03
ABCA3Q99758 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
ABCA3Q99758 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
ABCA3Q99758 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ABCA3Q99758 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ABCA3Q99758 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC21.51■■□□□ 1.03
ABCA3Q99758 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ABCA3Q99758 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ABCA3Q99758 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC21.51■■□□□ 1.03
ABCA3Q99758 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC21.51■■□□□ 1.03
ABCA3Q99758 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ABCA3Q99758 GGT3P-204ENST00000453783 1664 ntBASIC21.51■■□□□ 1.03
ABCA3Q99758 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ABCA3Q99758 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ABCA3Q99758 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ABCA3Q99758 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ABCA3Q99758 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ABCA3Q99758 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21.51■■□□□ 1.03
ABCA3Q99758 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC21.51■■□□□ 1.03
ABCA3Q99758 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
ABCA3Q99758 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ABCA3Q99758 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
ABCA3Q99758 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ABCA3Q99758 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
ABCA3Q99758 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC21.51■■□□□ 1.03
ABCA3Q99758 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
ABCA3Q99758 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ABCA3Q99758 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ABCA3Q99758 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
ABCA3Q99758 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ABCA3Q99758 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ABCA3Q99758 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ABCA3Q99758 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ABCA3Q99758 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ABCA3Q99758 AL391256.1-201ENST00000443260 1855 ntBASIC21.5■■□□□ 1.03
ABCA3Q99758 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC21.5■■□□□ 1.03
ABCA3Q99758 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC21.5■■□□□ 1.03
ABCA3Q99758 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC21.5■■□□□ 1.03
ABCA3Q99758 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC21.5■■□□□ 1.03
ABCA3Q99758 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC21.5■■□□□ 1.03
ABCA3Q99758 HNRNPUP1-201ENST00000554987 333 ntBASIC21.5■■□□□ 1.03
ABCA3Q99758 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC21.5■■□□□ 1.03
ABCA3Q99758 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ABCA3Q99758 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ABCA3Q99758 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ABCA3Q99758 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC21.5■■□□□ 1.03
ABCA3Q99758 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ABCA3Q99758 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.5■■□□□ 1.03
ABCA3Q99758 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms