Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.19■□□□□ 0.18
RAB3IPQ96QF0 MTCL1P1-201ENST00000446207 792 ntBASIC16.19■□□□□ 0.18
RAB3IPQ96QF0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IPQ96QF0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IPQ96QF0 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IPQ96QF0 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IPQ96QF0 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB3IPQ96QF0 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB3IPQ96QF0 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IPQ96QF0 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB3IPQ96QF0 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IPQ96QF0 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB3IPQ96QF0 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IPQ96QF0 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IPQ96QF0 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IPQ96QF0 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB3IPQ96QF0 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RAB3IPQ96QF0 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IPQ96QF0 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IPQ96QF0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IPQ96QF0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IPQ96QF0 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IPQ96QF0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IPQ96QF0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB3IPQ96QF0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB3IPQ96QF0 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 CCR12P-201ENST00000446203 998 ntBASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
RAB3IPQ96QF0 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 AL157888.1-201ENST00000631930 593 ntBASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms