Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 REXO1L8P-201ENST00000604378 1897 ntBASIC19.57■□□□□ 0.72
NEK1Q96PY6 KRT18P13-201ENST00000400056 1290 ntBASIC19.57■□□□□ 0.72
NEK1Q96PY6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.57■□□□□ 0.72
NEK1Q96PY6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.57■□□□□ 0.72
NEK1Q96PY6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NEK1Q96PY6 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.57■□□□□ 0.72
NEK1Q96PY6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.57■□□□□ 0.72
NEK1Q96PY6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.57■□□□□ 0.72
NEK1Q96PY6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
NEK1Q96PY6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
NEK1Q96PY6 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.57■□□□□ 0.72
NEK1Q96PY6 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NEK1Q96PY6 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEK1Q96PY6 AC005622.1-201ENST00000636801 1703 ntBASIC19.56■□□□□ 0.72
NEK1Q96PY6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEK1Q96PY6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.56■□□□□ 0.72
NEK1Q96PY6 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NEK1Q96PY6 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEK1Q96PY6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NEK1Q96PY6 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEK1Q96PY6 AL513523.2-202ENST00000427283 2040 ntBASIC19.56■□□□□ 0.72
NEK1Q96PY6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEK1Q96PY6 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEK1Q96PY6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NEK1Q96PY6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.56■□□□□ 0.72
NEK1Q96PY6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.56■□□□□ 0.72
NEK1Q96PY6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
NEK1Q96PY6 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.56■□□□□ 0.72
NEK1Q96PY6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.56■□□□□ 0.72
NEK1Q96PY6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEK1Q96PY6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEK1Q96PY6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEK1Q96PY6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEK1Q96PY6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NEK1Q96PY6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.56■□□□□ 0.72
NEK1Q96PY6 AC068137.2-201ENST00000605408 478 ntBASIC19.56■□□□□ 0.72
NEK1Q96PY6 CROCCP1-201ENST00000426910 5675 ntBASIC19.56■□□□□ 0.72
NEK1Q96PY6 AC006449.6-201ENST00000612330 2296 ntBASIC19.56■□□□□ 0.72
NEK1Q96PY6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NEK1Q96PY6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
NEK1Q96PY6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEK1Q96PY6 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEK1Q96PY6 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEK1Q96PY6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEK1Q96PY6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.56■□□□□ 0.72
NEK1Q96PY6 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEK1Q96PY6 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NEK1Q96PY6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NEK1Q96PY6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.55■□□□□ 0.72
NEK1Q96PY6 AL596087.1-201ENST00000400979 1969 ntBASIC19.55■□□□□ 0.72
NEK1Q96PY6 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.55■□□□□ 0.72
NEK1Q96PY6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.55■□□□□ 0.72
NEK1Q96PY6 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.55■□□□□ 0.72
NEK1Q96PY6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
NEK1Q96PY6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NEK1Q96PY6 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
NEK1Q96PY6 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NEK1Q96PY6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.55■□□□□ 0.72
NEK1Q96PY6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
NEK1Q96PY6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NEK1Q96PY6 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
NEK1Q96PY6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.55■□□□□ 0.72
NEK1Q96PY6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.55■□□□□ 0.72
NEK1Q96PY6 AP002472.1-201ENST00000577490 586 ntBASIC19.55■□□□□ 0.72
NEK1Q96PY6 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
NEK1Q96PY6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NEK1Q96PY6 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
NEK1Q96PY6 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NEK1Q96PY6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
NEK1Q96PY6 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
NEK1Q96PY6 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NEK1Q96PY6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NEK1Q96PY6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NEK1Q96PY6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.54■□□□□ 0.72
NEK1Q96PY6 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEK1Q96PY6 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NEK1Q96PY6 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.54■□□□□ 0.72
NEK1Q96PY6 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.54■□□□□ 0.72
NEK1Q96PY6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.54■□□□□ 0.72
NEK1Q96PY6 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NEK1Q96PY6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
NEK1Q96PY6 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.54■□□□□ 0.72
NEK1Q96PY6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEK1Q96PY6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEK1Q96PY6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEK1Q96PY6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NEK1Q96PY6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.54■□□□□ 0.72
NEK1Q96PY6 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.54■□□□□ 0.72
NEK1Q96PY6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
NEK1Q96PY6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.54■□□□□ 0.72
NEK1Q96PY6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.54■□□□□ 0.72
NEK1Q96PY6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NEK1Q96PY6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NEK1Q96PY6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.54■□□□□ 0.72
NEK1Q96PY6 AL078644.1-201ENST00000609881 752 ntBASIC19.54■□□□□ 0.72
NEK1Q96PY6 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.54■□□□□ 0.72
NEK1Q96PY6 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.54■□□□□ 0.72
NEK1Q96PY6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
NEK1Q96PY6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
NEK1Q96PY6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms