Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
AP1S3Q96PC3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
AP1S3Q96PC3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
AP1S3Q96PC3 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
AP1S3Q96PC3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 SLC25A1P3-201ENST00000395415 828 ntBASIC12.58□□□□□ -0.4
AP1S3Q96PC3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 SNORA78-201ENST00000459373 127 ntBASIC12.58□□□□□ -0.4
AP1S3Q96PC3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 AC141257.4-201ENST00000634557 245 ntBASIC12.58□□□□□ -0.4
AP1S3Q96PC3 AC136944.6-201ENST00000634818 245 ntBASIC12.58□□□□□ -0.4
AP1S3Q96PC3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC12.58□□□□□ -0.4
AP1S3Q96PC3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 AL009178.2-201ENST00000597278 2719 ntBASIC12.57□□□□□ -0.4
AP1S3Q96PC3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 MMP23A-201ENST00000234610 1017 ntBASIC12.57□□□□□ -0.4
AP1S3Q96PC3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 IGHGP-201ENST00000390555 1178 ntBASIC12.57□□□□□ -0.4
AP1S3Q96PC3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
AP1S3Q96PC3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms