Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 REXO1L8P-201ENST00000604378 1897 ntBASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 LINC02447-202ENST00000501888 2146 ntBASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 AC012306.2-201ENST00000609350 630 ntBASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 AC097493.4-201ENST00000641197 219 ntBASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 KRT8P39-201ENST00000396270 1433 ntBASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 SIGLEC16-201ENST00000599858 1437 ntBASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NSMCE2Q96MF7 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 PCGF3-213ENST00000620529 1899 ntBASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 AC096582.2-201ENST00000510860 516 ntBASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 AL590326.2-201ENST00000625139 305 ntBASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 AC112504.1-201ENST00000623415 1841 ntBASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 AL590787.1-201ENST00000568856 1315 ntBASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.66■□□□□ 0.1
NSMCE2Q96MF7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NSMCE2Q96MF7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NSMCE2Q96MF7 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NSMCE2Q96MF7 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NSMCE2Q96MF7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.65■□□□□ 0.1
NSMCE2Q96MF7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NSMCE2Q96MF7 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NSMCE2Q96MF7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
NSMCE2Q96MF7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NSMCE2Q96MF7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.65■□□□□ 0.1
NSMCE2Q96MF7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.65■□□□□ 0.1
NSMCE2Q96MF7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NSMCE2Q96MF7 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NSMCE2Q96MF7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.65■□□□□ 0.1
NSMCE2Q96MF7 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NSMCE2Q96MF7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
NSMCE2Q96MF7 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NSMCE2Q96MF7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NSMCE2Q96MF7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.65■□□□□ 0.1
NSMCE2Q96MF7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.65■□□□□ 0.1
NSMCE2Q96MF7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.65■□□□□ 0.1
NSMCE2Q96MF7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NSMCE2Q96MF7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.65■□□□□ 0.1
NSMCE2Q96MF7 MINOS1P3-201ENST00000457048 203 ntBASIC15.65■□□□□ 0.1
NSMCE2Q96MF7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms